Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0519
         (584 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051796-1|AAK93220.1|  800|Drosophila melanogaster LD31211p pro...    28   8.1  
AJ238970-1|CAB53186.1|  800|Drosophila melanogaster cap binding ...    28   8.1  
AE014298-657|AAF45970.1|  800|Drosophila melanogaster CG7035-PB,...    28   8.1  
AE014298-656|AAN09124.1|  800|Drosophila melanogaster CG7035-PA,...    28   8.1  

>AY051796-1|AAK93220.1|  800|Drosophila melanogaster LD31211p
           protein.
          Length = 800

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = -3

Query: 264 PRGLDL--GCQLVNIFYLVPAVSGTF--SSTWLAYC-CDELNTSCFNFFITQKYQLISTY 100
           PR LD+  G  L+ +  L PA        +T + +   D +NTSCF+ F+      +S +
Sbjct: 368 PRYLDICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSYHLSNF 427

Query: 99  YFKW 88
            F W
Sbjct: 428 KFTW 431


>AJ238970-1|CAB53186.1|  800|Drosophila melanogaster cap binding
           protein 80 protein.
          Length = 800

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = -3

Query: 264 PRGLDL--GCQLVNIFYLVPAVSGTF--SSTWLAYC-CDELNTSCFNFFITQKYQLISTY 100
           PR LD+  G  L+ +  L PA        +T + +   D +NTSCF+ F+      +S +
Sbjct: 368 PRYLDICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSYHLSNF 427

Query: 99  YFKW 88
            F W
Sbjct: 428 KFTW 431


>AE014298-657|AAF45970.1|  800|Drosophila melanogaster CG7035-PB,
           isoform B protein.
          Length = 800

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = -3

Query: 264 PRGLDL--GCQLVNIFYLVPAVSGTF--SSTWLAYC-CDELNTSCFNFFITQKYQLISTY 100
           PR LD+  G  L+ +  L PA        +T + +   D +NTSCF+ F+      +S +
Sbjct: 368 PRYLDICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSYHLSNF 427

Query: 99  YFKW 88
            F W
Sbjct: 428 KFTW 431


>AE014298-656|AAN09124.1|  800|Drosophila melanogaster CG7035-PA,
           isoform A protein.
          Length = 800

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = -3

Query: 264 PRGLDL--GCQLVNIFYLVPAVSGTF--SSTWLAYC-CDELNTSCFNFFITQKYQLISTY 100
           PR LD+  G  L+ +  L PA        +T + +   D +NTSCF+ F+      +S +
Sbjct: 368 PRYLDICYGSILIELCKLQPATLPQVLAQATEILFMRIDSMNTSCFDRFVNWFSYHLSNF 427

Query: 99  YFKW 88
            F W
Sbjct: 428 KFTW 431


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,583,941
Number of Sequences: 53049
Number of extensions: 442346
Number of successful extensions: 922
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)