Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0519
         (584 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47745-1|CAA87663.1|  358|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.     29   2.4  
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso...    29   2.4  
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso...    29   2.4  
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso...    29   2.4  
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso...    29   2.4  
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.     29   2.4  
U55365-1|AAA98567.1|  127|Caenorhabditis elegans Hypothetical pr...    28   5.6  

>Z47745-1|CAA87663.1|  358|Caenorhabditis elegans Hypothetical
           protein T19H5.2 protein.
          Length = 358

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +1

Query: 148 GCVEFVTAISKPSRTESTRYSWH*VKNVNQLTSEVKTS-RERLSRHLGSMASQKPLLAVF 324
           G ++F +AISK       R S H   NVN++ S   T+  E+LS  L  +   +  +   
Sbjct: 108 GSLQFESAISKQKFLNLNRKSKHINNNVNRILSIGGTNYSEKLSIMLQDLKKTRRFIMSI 167

Query: 325 AVH*RFVKYNNMNSLKLQAFMYSLVNEYCILL 420
               RF+K N ++ ++L     +    YC LL
Sbjct: 168 I---RFLKDNELDGVELLWNRNTEETLYCELL 196


>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
          Length = 4250

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 312  QWFLRGH*PQMTAESFPRGLDLGCQLVNIFYLVPAVSGTFS 190
            +W + G  P M A  F    D G   +NI Y  P  +GT++
Sbjct: 1124 EWLVNGQ-PLMKAHRFVLSQDFGYIALNILYCYPEDNGTYT 1163


>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform b protein.
          Length = 4203

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 312  QWFLRGH*PQMTAESFPRGLDLGCQLVNIFYLVPAVSGTFS 190
            +W + G  P M A  F    D G   +NI Y  P  +GT++
Sbjct: 1041 EWLVNGQ-PLMKAHRFVLSQDFGYIALNILYCYPEDNGTYT 1080


>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform a protein.
          Length = 4488

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 312  QWFLRGH*PQMTAESFPRGLDLGCQLVNIFYLVPAVSGTFS 190
            +W + G  P M A  F    D G   +NI Y  P  +GT++
Sbjct: 1362 EWLVNGQ-PLMKAHRFVLSQDFGYIALNILYCYPEDNGTYT 1401


>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform d protein.
          Length = 4369

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 312  QWFLRGH*PQMTAESFPRGLDLGCQLVNIFYLVPAVSGTFS 190
            +W + G  P M A  F    D G   +NI Y  P  +GT++
Sbjct: 1362 EWLVNGQ-PLMKAHRFVLSQDFGYIALNILYCYPEDNGTYT 1401


>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform c protein.
          Length = 4447

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 312  QWFLRGH*PQMTAESFPRGLDLGCQLVNIFYLVPAVSGTFS 190
            +W + G  P M A  F    D G   +NI Y  P  +GT++
Sbjct: 1362 EWLVNGQ-PLMKAHRFVLSQDFGYIALNILYCYPEDNGTYT 1401


>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
          Length = 4219

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 312  QWFLRGH*PQMTAESFPRGLDLGCQLVNIFYLVPAVSGTFS 190
            +W + G  P M A  F    D G   +NI Y  P  +GT++
Sbjct: 1057 EWLVNGQ-PLMKAHRFVLSQDFGYIALNILYCYPEDNGTYT 1096


>U55365-1|AAA98567.1|  127|Caenorhabditis elegans Hypothetical
           protein C12D5.5 protein.
          Length = 127

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 470 HCHTYSEYKKIPVPTINN 417
           HC+T +EY+  P+ T NN
Sbjct: 22  HCYTMNEYQSHPITTTNN 39


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,528,632
Number of Sequences: 27780
Number of extensions: 248157
Number of successful extensions: 577
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)