Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0518
(682 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1419 + 37225007-37225011,37225633-37225852,37226347-372265... 105 4e-23
02_02_0678 + 12868735-12868739,12869576-12869795,12870280-128704... 103 1e-22
08_02_1568 + 27922338-27922342,27922839-27923058,27923369-279235... 102 2e-22
08_02_1573 + 27956351-27956409,27956411-27956630,27957000-279571... 101 4e-22
05_07_0079 - 27539389-27539892,27540059-27540343,27540453-275405... 43 3e-04
04_04_0401 - 24946801-24947562 42 6e-04
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 1.1
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 30 1.5
02_05_1241 - 35189111-35189389,35189604-35189711,35189982-351907... 30 2.0
07_03_1496 + 26986625-26986791,26987757-26987913,26988008-26988055 29 2.6
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 29 4.5
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020... 29 4.5
03_02_0221 + 6533643-6533687,6533860-6533955,6535323-6535682,653... 28 7.9
>01_06_1419 +
37225007-37225011,37225633-37225852,37226347-37226516,
37226615-37226676,37227002-37227207,37227581-37227634
Length = 238
Score = 105 bits (251), Expect = 4e-23
Identities = 46/72 (63%), Positives = 59/72 (81%)
Frame = +2
Query: 44 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 223
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 224 MQVCVLGDQQLV 259
M+VC+LGD Q V
Sbjct: 62 MKVCMLGDAQHV 73
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = +3
Query: 510 MKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMG 668
+KKVLC+ VAVG+ M ++ QNV +S+NFLVSLLKK+WQNVR L++KSTMG
Sbjct: 180 LKKVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMG 232
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 22/68 (32%)
Frame = +1
Query: 373 SESLIKQIPRLLGPGLNKAGK----------------------FPGLLSHQESMTQKIDE 486
SE++IKQIPRLLGPGLNKAGK FP L++HQES+ K++E
Sbjct: 112 SEAIIKQIPRLLGPGLNKAGKILLVYGRSILKSSYIIVSKRGKFPTLVTHQESLESKVNE 171
Query: 487 VKGTIKFQ 510
K T+KFQ
Sbjct: 172 TKATVKFQ 179
>02_02_0678 +
12868735-12868739,12869576-12869795,12870280-12870430,
12870853-12871058,12871166-12871219
Length = 211
Score = 103 bits (248), Expect = 1e-22
Identities = 45/72 (62%), Positives = 59/72 (81%)
Frame = +2
Query: 44 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 223
SK+ D L E ++ + S++K+R F+ET+ELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQSDALREAISQIANDSREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 224 MQVCVLGDQQLV 259
++VC+LGD Q V
Sbjct: 62 LKVCMLGDAQHV 73
Score = 77.4 bits (182), Expect = 1e-14
Identities = 35/57 (61%), Positives = 45/57 (78%)
Frame = +3
Query: 510 MKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQR 680
+KKVLC+ VAVG+ M ++ QNV +S+NFLVSLLKK+WQNVR L++KSTMG R
Sbjct: 153 LKKVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKVYR 209
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 373 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ 510
SE++IKQIPRLLGPG KFP L++HQES+ K++E K T+KFQ
Sbjct: 112 SEAIIKQIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQ 152
>08_02_1568 +
27922338-27922342,27922839-27923058,27923369-27923519,
27923874-27924079,27924211-27924264
Length = 211
Score = 102 bits (245), Expect = 2e-22
Identities = 47/72 (65%), Positives = 57/72 (79%)
Frame = +2
Query: 44 SKVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPK 223
SK+ + L E ++ V+ K+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPK
Sbjct: 2 SKLQTEALKEAISQVVADCKEKNRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 224 MQVCVLGDQQLV 259
M+VC+LGD Q V
Sbjct: 62 MKVCMLGDAQHV 73
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/57 (61%), Positives = 47/57 (82%)
Frame = +3
Query: 510 MKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQR 680
+KKVLC+ VAVG++ M ++ QN+ +S+NFLVSLLKK+WQNVR L++KSTMG P R
Sbjct: 153 LKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPYR 209
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 373 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ 510
SE++IKQIPRLLGPG KFP L++HQES+ K++E K T+KFQ
Sbjct: 112 SEAIIKQIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQ 152
>08_02_1573 +
27956351-27956409,27956411-27956630,27957000-27957150,
27957602-27957807,27957967-27958020
Length = 229
Score = 101 bits (243), Expect = 4e-22
Identities = 47/71 (66%), Positives = 57/71 (80%)
Frame = +2
Query: 47 KVSRDTLYECVNAVLQSSKDKKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKM 226
K+ + L E ++ V+ SK+K R F ETVELQIGLKNYDPQKDKRFSG+VKL +IPRPKM
Sbjct: 21 KLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPKM 80
Query: 227 QVCVLGDQQLV 259
+VC+LGD Q V
Sbjct: 81 KVCMLGDAQHV 91
Score = 81.4 bits (192), Expect = 6e-16
Identities = 35/57 (61%), Positives = 47/57 (82%)
Frame = +3
Query: 510 MKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQR 680
+KKVLC+ VAVG++ M ++ QN+ +S+NFLVSLLKK+WQNVR L++KSTMG P R
Sbjct: 171 LKKVLCMGVAVGNLSMEEKQIQQNIQMSVNFLVSLLKKNWQNVRCLYIKSTMGKPIR 227
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 373 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ 510
SE++IKQIPRLLGPG KFP L++HQES+ K++E K T+KFQ
Sbjct: 130 SEAIIKQIPRLLGPG-----KFPTLVTHQESLESKVNETKATVKFQ 170
>05_07_0079 -
27539389-27539892,27540059-27540343,27540453-27540550,
27540951-27541042,27541155-27541259,27541360-27541567,
27542469-27542472,27542742-27542765,27545025-27546266
Length = 853
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 525 CLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 659
C + VG +DM ++ +NV ++ V + K W NVRSLH+K+
Sbjct: 195 CSGIKVGRLDMKEEDTVENVMAAVEAAVENVPKKWANVRSLHLKA 239
>04_04_0401 - 24946801-24947562
Length = 253
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 525 CLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 659
C +V VGH M +E +NV ++ + + + W+NVR+LH+K+
Sbjct: 152 CRAVRVGHAAMAREEAVENVVAAVEAAAACVPRKWRNVRALHVKA 196
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 95 SSKDKKRNFLETVELQIGLKNYDPQK-DKRFSGTVKLKYIPRPKMQVCVLGD 247
S+ +KKRNF ETVE + L DP++ D+ G + L + ++V V +
Sbjct: 279 SANEKKRNFTETVEAHVML-GVDPRRGDQMVRGALTLPHGTGKTVRVAVFAE 329
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 376 ESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQ*RRC 522
E+L QI +L G G + ++ L+ ESMT++ D+++ + + ++C
Sbjct: 1735 ETLRAQIDQLQGDGAEQMNRYQSLMLELESMTKQRDDLQEKLGQEEQKC 1783
>02_05_1241 -
35189111-35189389,35189604-35189711,35189982-35190713,
35190811-35191230,35191484-35191565,35191719-35192002,
35193104-35193256
Length = 685
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3
Query: 570 LAQNVHLSINFLVSLLKKH 626
+ + VHLS+NF++ L+KKH
Sbjct: 302 IVEGVHLSLNFVMGLMKKH 320
>07_03_1496 + 26986625-26986791,26987757-26987913,26988008-26988055
Length = 123
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = -2
Query: 336 DKLFVLIQFFQSLSIHTWHIQGFSLVTSCWSP----RTQTCIFGRGMY 205
+KLF Q+FQ+L+ HT+ + ++TS P T + GRG+Y
Sbjct: 66 EKLFKQQQYFQNLTKHTYLKGRYDVITSVAIPLALAGTSLFMIGRGVY 113
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 552 DMTPDELAQNVHLSINFLVSLLKKH 626
D + + VHLS+NF++ L++KH
Sbjct: 262 DRKESVVVEGVHLSLNFVMGLMRKH 286
>03_02_0829 -
11599665-11600364,11600853-11601076,11601786-11602000,
11602300-11602377,11602593-11603907
Length = 843
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 194 QCRRNACPSVGHSSSDQFEALQSPKS 117
Q RN PS+ H +SD F + SP S
Sbjct: 81 QKSRNLSPSISHQASDSFSPVPSPLS 106
>03_02_0221 +
6533643-6533687,6533860-6533955,6535323-6535682,
6537106-6537177,6537374-6537697
Length = 298
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 227 AFSAAVCILALQCRRNACPSVGH 159
A A VCI L+CR+ CP H
Sbjct: 110 ASRAEVCIFCLRCRQVLCPRCSH 132
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,367,866
Number of Sequences: 37544
Number of extensions: 403300
Number of successful extensions: 1068
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1027
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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