Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0517
(762 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 63 2e-10
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 59 3e-09
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 58 8e-09
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 51 1e-06
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_34654| Best HMM Match : zf-C2H2 (HMM E-Value=8e-31) 31 1.4
SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043) 30 2.4
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_3297| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_31241| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Frame = +2
Query: 254 NAFLRSGNYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHIVG 421
N L G++NVI+VDW + ++ AV VG+ A L+ L+ L VH++G
Sbjct: 136 NELLWEGDFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHVIG 195
Query: 422 FNLGAHVAGVTGRNLEGK---VARITGLDPSAV 511
F+ GAHVAG GR ++ + + RIT LDP+A+
Sbjct: 196 FSFGAHVAGYVGRRMKKRGRMIDRITALDPAAM 228
Score = 50.4 bits (115), Expect = 2e-06
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Frame = +1
Query: 529 LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDFFVNGRLVQPGCTN--------NLCS 684
+RL T+DA +V+VIHT G+ IGH DF+ NG QPGC N C
Sbjct: 237 VRLDTSDALFVDVIHTSAD----YGITSTIGHADFYPNGGKKQPGCDNFFRGFSSYLFCG 292
Query: 685 HNRAYEVFAATI-THGKHYGNQCSTE 759
H RA +F ++ T Y C +E
Sbjct: 293 HKRAPALFTTSLYTKTPLYSYPCRSE 318
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 59.3 bits (137), Expect = 3e-09
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Frame = +2
Query: 263 LRSGNYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKN-LKLPLNK----VHIVGFN 427
LR + NVI+VDW + Y AV VG+ +A F+K L L ++ H +GF+
Sbjct: 120 LRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFHSIGFS 179
Query: 428 LGAHVAGVTGRNLE--GK-VARITGLDPSAVIGK 520
LGAH++G G+ L+ G+ + RITGLDP+ ++ K
Sbjct: 180 LGAHISGYVGQRLKRIGRHLDRITGLDPATLMFK 213
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +1
Query: 457 KKFGRQSSKNYGSRPFGCDWENNV--LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHID 630
K+ GR + G P ++ +RL DAQ+V+VIHT G+ GH+D
Sbjct: 193 KRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVIHTS----YVFGITAPHGHMD 248
Query: 631 FFVNGRLVQPGCT 669
F+ NG Q GC+
Sbjct: 249 FYPNGGTSQRGCS 261
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 58.0 bits (134), Expect = 8e-09
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +2
Query: 281 NVIVVDWSSFS--LSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHIVGFNLGAHV 442
NVI VDW S + L+ Y A VG+ +A + ++ L +VH++G +LGAHV
Sbjct: 55 NVITVDWQSGADGLNLYHVAAGNTRVVGAQLAELITTIQRVFDFDLRRVHLIGHSLGAHV 114
Query: 443 AGVTGRNLEGKVARIT 490
AG G L GKV RIT
Sbjct: 115 AGYAGERLSGKVGRIT 130
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 56.4 bits (130), Expect = 2e-08
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Frame = +2
Query: 254 NAFLRSGNYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLKLPLNKV----HIVG 421
+A ++ + NVI DWS + Y A VG+ I +K L ++VG
Sbjct: 634 HALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYLVG 693
Query: 422 FNLGAHVAGVTGRNLE---GKVARITGLDPSAV 511
F+LGAH++G GR + K+ RITGLDP+++
Sbjct: 694 FSLGAHISGYVGRRIAKTGQKLNRITGLDPASI 726
Score = 50.4 bits (115), Expect = 2e-06
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Frame = +1
Query: 529 LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDFFVNGRLVQPGCTNNL--------CS 684
+RL +DA +V+V+HTD ++ G GHIDF+ NG QPGC + L C
Sbjct: 735 VRLDPSDADFVDVMHTD---MDLAGTPTVSGHIDFYPNGGKKQPGCRDLLDGPINYVICD 791
Query: 685 HNRAYEVFAATIT 723
H RA E +A ++T
Sbjct: 792 HMRAPEYYAESVT 804
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 8/73 (10%)
Frame = +1
Query: 529 LRLGTNDAQYVEVIHTDGSGVNKNGLGIAIGHIDFFVNGRLVQPGC-------TNNL-CS 684
+RL +DA++V+V+HTD ++ G GHIDF+ NG QPGC +N L C
Sbjct: 16 VRLDPSDAEFVDVMHTD---MDFAGTSTQSGHIDFYPNGGKNQPGCRDIADGPSNALKCD 72
Query: 685 HNRAYEVFAATIT 723
H RA++ F +IT
Sbjct: 73 HVRAHDYFTESIT 85
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/49 (24%), Positives = 25/49 (51%)
Frame = +2
Query: 365 IATFLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPSAV 511
+ +FL + + K H+ G ++G H+ GV +VA + + P+ +
Sbjct: 120 LLSFLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPAGI 168
>SB_34654| Best HMM Match : zf-C2H2 (HMM E-Value=8e-31)
Length = 624
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 69 RFGSLNKYYYYSNAQRNPITLTEDHFPTGNDPAAPFNNNWDIVVIIHGHSGTATTTIN 242
R+ K Y + ++ R + + HF G++PA ++NN D+ + H + T IN
Sbjct: 548 RYSGCEKSYTHPSSLRKHL---KAHFKCGDNPAGIYDNNNDLETPVPPHRESKTARIN 602
>SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043)
Length = 183
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 374 FLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPSAV 511
FL + + K H+ G ++G H+ GV +VA + + P+ +
Sbjct: 1 FLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPAGI 46
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +2
Query: 413 IVGFNLGAHVAGVTG---RNLEG-KVARITG 493
++GF+LG HVAG G +N G K+ RI+G
Sbjct: 21 VIGFSLGGHVAGYAGSRIKNTTGLKLGRISG 51
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 628 DFFVNGRLVQPGCTNNLCSHNRAYEVFAATITHGKHYGNQCSTEA 762
D++ ++ G T+ C YE T GK YGN+C A
Sbjct: 1278 DYYAQCQVEDDGSTSCKCPIFCTYEYMPVCGTDGKTYGNKCEMRA 1322
>SB_3297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -2
Query: 263 KTRFNNRVDRRRSSATVTVYYYDNIPIIVKGRSRIVSSGKVVFGECNWVSLC 108
KT N RR S Y+ + P V RS + +V C+WV+LC
Sbjct: 78 KTIINQYPAARRYSVITRYYFGVSRPFSVINRSSSIVPKGLVLILCSWVTLC 129
>SB_31241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 455 GRNLEGKVARITGLDPSAVIGKT 523
GR +GK+A I+ LDP+ +GKT
Sbjct: 116 GRTQKGKLASISTLDPAREVGKT 138
>SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +1
Query: 595 KNGLGIAIG---HIDFFVNGRLVQPGCTNNLCSHNRA 696
K+ G+ IG H+D VNG VQ C+HN+A
Sbjct: 12 KSSEGMYIGADLHLDKDVNGAYVQGSFIGGFCTHNKA 48
>SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 820
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +1
Query: 487 YGSRPFGCDWENNVLRLGTNDAQYVEVI 570
YG P GC E N+ RLGT A VI
Sbjct: 603 YGQSPGGCWMEKNLSRLGTMHAPVSMVI 630
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,075,364
Number of Sequences: 59808
Number of extensions: 531079
Number of successful extensions: 1578
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1569
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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