Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0515
         (718 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0383 - 43195095-43195322,43195408-43195638,43196134-431964...    28   8.5  

>01_07_0383 -
           43195095-43195322,43195408-43195638,43196134-43196454,
           43196512-43196589,43196664-43197727,43197813-43198503,
           43198743-43199541,43200010-43200158,43200159-43200286,
           43200389-43200494,43200835-43200843,43201332-43201821,
           43201896-43202554,43203759-43203851,43204044-43204196,
           43205092-43205194,43205376-43205467,43206229-43206306,
           43206987-43207049,43207339-43207512
          Length = 1902

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -2

Query: 645 IKLITYSLSKSSWHSY 598
           IKLITY L+K  WH Y
Sbjct: 484 IKLITYFLAKVVWHDY 499


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,933,504
Number of Sequences: 37544
Number of extensions: 71964
Number of successful extensions: 111
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)