Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0514
(468 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 1.2
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.0
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.0
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.0
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 5.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 5.0
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 5.0
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 5.0
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.0
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 6.6
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 21 8.7
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 8.7
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 8.7
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 8.7
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.4 bits (48), Expect = 1.2
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -2
Query: 455 SNGSNVSNLDRLGDGSIDNNHGLSYDFGFVNDNHGLWDNGIDTGSGDNRGRASL 294
SN S ++ + + S +NN+ + + N+N+G DNG G+ +N +
Sbjct: 223 SNNSTITAGNANTNASNNNNNNNNNN----NNNNGANDNGNGNGASNNNNNGDM 272
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 213 NGDRYELVDDGRPNGDRFEFVDNG 142
+G++ +LV GD +F+ NG
Sbjct: 135 DGNQVDLVLSSETGGDLSDFITNG 158
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 213 NGDRYELVDDGRPNGDRFEFVDNG 142
+G++ +LV GD +F+ NG
Sbjct: 135 DGNQVDLVLSSETGGDLSDFITNG 158
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 213 NGDRYELVDDGRPNGDRFEFVDNG 142
+G++ +LV GD +F+ NG
Sbjct: 135 DGNQVDLVLSSETGGDLSDFITNG 158
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 213 NGDRYELVDDGRPNGDRFEFVDNG 142
+G++ +LV GD +F+ NG
Sbjct: 135 DGNQVDLVLSSETGGDLSDFITNG 158
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 213 NGDRYELVDDGRPNGDRFEFVDNG 142
+G++ +LV GD +F+ NG
Sbjct: 135 DGNQVDLVLSSETGGDLSDFITNG 158
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 213 NGDRYELVDDGRPNGDRFEFVDNG 142
+G++ +LV GD +F+ NG
Sbjct: 135 DGNQVDLVLSSETGGDLSDFITNG 158
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 213 NGDRYELVDDGRPNGDRFEFVDNG 142
+G++ +LV GD +F+ NG
Sbjct: 203 DGNQVDLVLSSETGGDLSDFITNG 226
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 5.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 213 NGDRYELVDDGRPNGDRFEFVDNG 142
+G++ +LV GD +F+ NG
Sbjct: 203 DGNQVDLVLSSETGGDLSDFITNG 226
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 116 SSMMAGPTAIGTKSSMM 66
+S +AG AIGT + MM
Sbjct: 275 NSTLAGGVAIGTAAGMM 291
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 5.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 1 VAVAVAGPTKGLVSPGVAA 57
V AVAG G + PG+AA
Sbjct: 59 VGSAVAGTAGGALFPGMAA 77
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = +3
Query: 96 RTCHHR*VRAHFSRTCHCQR 155
R HH AH RT H R
Sbjct: 149 RCLHHDIENAHIRRTLHMNR 168
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.0 bits (42), Expect = 6.6
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = -2
Query: 365 NDNHGLWDNGIDTGSGDNRGRASLVDVQND 276
ND L++NG++ G ++ V+V D
Sbjct: 160 NDEKSLFENGVEIGINFDKYDNIQVNVSGD 189
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = +3
Query: 87 YRCRTCHHR*VRAHFSRT 140
+ C CH R R H +T
Sbjct: 10 FECPECHKRFTRDHHLKT 27
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 214 GPAIVDNPPLAPVAT 258
GP +V NP +A + T
Sbjct: 185 GPGVVSNPMIAELET 199
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 20.6 bits (41), Expect = 8.7
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 61 APIIDDFVPIAVGPAIIDEFEPISV 135
A I+ F+ + PA+ D +PI +
Sbjct: 496 ASIVGTFIILCEAPALRDNTKPIDM 520
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 214 GPAIVDNPPLAPVAT 258
GP +V NP +A + T
Sbjct: 185 GPGVVSNPMIAELET 199
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,107
Number of Sequences: 438
Number of extensions: 2219
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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