Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0514
(468 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g07730.2 68414.m00834 disease resistance-responsive family pr... 34 0.055
At4g34300.1 68417.m04875 glycine-rich protein similar to auxin r... 33 0.096
At3g18810.1 68416.m02389 protein kinase family protein contains ... 32 0.17
At5g62940.1 68418.m07897 Dof-type zinc finger domain-containing ... 30 0.68
At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gen... 30 0.90
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 29 2.1
At3g29080.1 68416.m03641 hypothetical protein 29 2.1
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 28 2.7
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 28 3.6
At2g43010.2 68415.m05338 phytochrome-interacting factor 4 (PIF4)... 28 3.6
At2g43010.1 68415.m05337 phytochrome-interacting factor 4 (PIF4)... 28 3.6
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 28 3.6
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 28 3.6
At3g52120.1 68416.m05721 SWAP (Suppressor-of-White-APricot)/surp... 27 4.8
At5g14690.1 68418.m01721 expressed protein predicted protein, Ar... 27 6.3
At2g25980.1 68415.m03120 jacalin lectin family protein similar t... 27 6.3
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 27 8.4
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 27 8.4
At2g01760.1 68415.m00106 two-component responsive regulator fami... 27 8.4
At1g70740.1 68414.m08154 protein kinase family protein contains ... 27 8.4
At1g47320.1 68414.m05239 expressed protein similar to putative n... 27 8.4
At1g27950.1 68414.m03424 lipid transfer protein-related low simi... 27 8.4
>At1g07730.2 68414.m00834 disease resistance-responsive family
protein contains Pfam PF03018: Plant disease resistance
response protein
Length = 389
Score = 33.9 bits (74), Expect = 0.055
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Frame = -2
Query: 254 ATGARGGLSTIAGPTEIGTNSSTMAGLTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKS 75
A+G G L T GP + T S++ L S +L + GP + ++S ++ G ++
Sbjct: 70 ASGGLGSLGTNTGPGPLSTTGSSL--LPVASSGTLPVTGPGPLPTSSGLLPGASSGNLPG 127
Query: 74 S------MMGAGAATPGL 39
S +G+GAA GL
Sbjct: 128 SGSGPLPTVGSGAAATGL 145
>At4g34300.1 68417.m04875 glycine-rich protein similar to auxin
response factor 30 (GI:20145855) {Arabidopsis thaliana}
Length = 313
Score = 33.1 bits (72), Expect = 0.096
Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 23/153 (15%)
Frame = -2
Query: 458 GSNG----SNVSNLDRLGDGSIDNNHGLSYDFGFVNDNHGL-WDNGIDTGSGDNRGRASL 294
GSNG S+ + GS N+ G S+ +G+ +D W G +GS + G S
Sbjct: 37 GSNGDWGWSSGGSFGSGSGGSDSNSGGSSWGWGWSSDGTDTNWGWGSSSGSNHSSGTGST 96
Query: 293 VDVQNDLHERSAVATGARGGLST------IAGPTE----IGTNSSTMAGLTE----IGSN 156
+ + S+ G S+ G T G+N S++ G T GSN
Sbjct: 97 HNGHSSGSNHSSGTGSTHNGHSSGSNHSSSTGSTHNNHSSGSNHSSIVGSTHKNHGSGSN 156
Query: 155 SLTMAGPT----EMGSNSSMMAGPTAIGTKSSM 69
++AGPT GSN S + G T T S+
Sbjct: 157 HSSIAGPTHNGHSSGSNHSSIIGSTHNHTAPSL 189
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 32.3 bits (70), Expect = 0.17
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = -2
Query: 452 NGSNVSNLDRLGDGSIDNNHGLSYD-FGFVNDNHGLWDNGIDTGSGDNRGRASLVDVQND 276
N +N +N + G+ + DNN+G + D N+N+G +NG D +N G + + QN+
Sbjct: 79 NNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNGNDNNGNNNNGNNNDNNNQNN 138
Query: 275 ---LHERSAVATGARGGLSTIAGPTEIGTNSSTMAGLTEIGSN 156
+ RS ++ + P + S+ G G+N
Sbjct: 139 GGGSNNRSPPPPSRNSDRNSPSPPRALAPPRSSGGGSNSSGNN 181
>At5g62940.1 68418.m07897 Dof-type zinc finger domain-containing
protein Dof zinc finger protein, Oryza sativa,
EMBL:AB028129
Length = 372
Score = 30.3 bits (65), Expect = 0.68
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Frame = -2
Query: 461 LGSNGSNVSNLDRLGDGSIDNNH----GLSYDFGFVNDNHGLWDNGIDTGSGDNRGRASL 294
+G N N+ ++ +G ++H GL++ G N+N+ NGI TG N G L
Sbjct: 217 MGVNNDNLVMVNHGSNGDHHHHHNHHMGLNHGVGLNNNNNNGGFNGISTGGNGNGG--GL 274
Query: 293 VDV 285
+D+
Sbjct: 275 MDI 277
>At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gene
for histone protein GB:X15142 GI:3204 [Physarum
polycephalum]
Length = 614
Score = 29.9 bits (64), Expect = 0.90
Identities = 25/87 (28%), Positives = 32/87 (36%)
Frame = -2
Query: 263 SAVATGARGGLSTIAGPTEIGTNSSTMAGLTEIGSNSLTMAGPTEMGSNSSMMAGPTAIG 84
S VA+G G + + G ++ G GS T AG SSM G A G
Sbjct: 444 SGVASGGSTGSESASAGAASGGSTEANGGAAAGGS---TEAGSGTSTETSSMGGGSAAAG 500
Query: 83 TKSSMMGAGAATPGLTRPLVGPATATA 3
S G+ G T +ATA
Sbjct: 501 GVSESSSGGSTAAGGTSESASGGSATA 527
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 94 VGPAIIDEFEP-ISVGPAIVNEFEPISVRPAIVDEFVPISVG 216
+G +DE+ I PA+ F+P+ V VDE + I G
Sbjct: 406 IGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKG 447
>At3g29080.1 68416.m03641 hypothetical protein
Length = 445
Score = 28.7 bits (61), Expect = 2.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 227 TIAGPTEIGTNSSTMAGLTEIGSNSLTMAGPTEMGSNS 114
T +G TEIG ++ ++ +GS + T PT GS +
Sbjct: 321 TASGQTEIGVSTRCISTSVVVGSEATTNTEPTTTGSRT 358
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 257 VATGARGGLSTIAGPTEIGTNSSTMAGLTEIGSNSLT 147
+ TGA G L + TEI TM G++EIG +LT
Sbjct: 555 ITTGAAGDLQQV---TEIARQMVTMFGMSEIGPWALT 588
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 94 VGPAIIDEFEP-ISVGPAIVNEFEPISVRPAIVDEFVPISVG 216
+G IDE+ I PA+ F+P+ V V+E + I G
Sbjct: 427 IGATTIDEYRKHIEKDPALERRFQPVKVPEPTVEEAIQILQG 468
>At2g43010.2 68415.m05338 phytochrome-interacting factor 4 (PIF4) /
basic helix-loop-helix protein 9 (bHLH9) / short under
red-light 2 (SRL2) identical to SP|Q8W2F3
Phytochrome-interacting factor 4 (Basic helix-loop-helix
protein 9) (bHLH9) (Short under red-light 2)
{Arabidopsis thaliana}; supporting cDNA
gi|18026965|gb|AF251694.1|AF251694
Length = 428
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 200 TNSSTMAGLTEIGSNSLTMAGPTEMGSNSS 111
TNSS+ TE+ S+T GP+ GSN S
Sbjct: 142 TNSSSGIRETEMEQYSVTTVGPSHCGSNPS 171
>At2g43010.1 68415.m05337 phytochrome-interacting factor 4 (PIF4) /
basic helix-loop-helix protein 9 (bHLH9) / short under
red-light 2 (SRL2) identical to SP|Q8W2F3
Phytochrome-interacting factor 4 (Basic helix-loop-helix
protein 9) (bHLH9) (Short under red-light 2)
{Arabidopsis thaliana}; supporting cDNA
gi|18026965|gb|AF251694.1|AF251694
Length = 430
Score = 27.9 bits (59), Expect = 3.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 200 TNSSTMAGLTEIGSNSLTMAGPTEMGSNSS 111
TNSS+ TE+ S+T GP+ GSN S
Sbjct: 142 TNSSSGIRETEMEQYSVTTVGPSHCGSNPS 171
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 27.9 bits (59), Expect = 3.6
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Frame = +1
Query: 22 PTKGLVSPGVAAPAPIIDDFVPIAVGPAIIDEFEPISVGPAIVNEFEPISVRPAIVDEFV 201
P P V+AP P+ P+ P + P+S P P + P +
Sbjct: 39 PPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPP---ASPPPATPPPVASPPP 95
Query: 202 PIS----VGPAIVDNPPLAPVAT 258
P++ P V PP AP+A+
Sbjct: 96 PVASPPPATPPPVATPPPAPLAS 118
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 27.9 bits (59), Expect = 3.6
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 4/83 (4%)
Frame = +1
Query: 22 PTKGLVSPGVAAPAPIIDDFVPIAVGPAIIDEFEPISVGPAIVNEFEPISVRPAIVDEFV 201
P P V+AP P+ P+ P + P+S P P + P +
Sbjct: 39 PPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPP---ASPPPATPPPVASPPP 95
Query: 202 PIS----VGPAIVDNPPLAPVAT 258
P++ P V PP AP+A+
Sbjct: 96 PVASPPPATPPPVATPPPAPLAS 118
>At3g52120.1 68416.m05721 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / D111/G-patch
domain-containing protein contains Pfam profiles
PF01585: G-patch domain, PF01805: Surp module
Length = 443
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -2
Query: 128 MGSNSSMMAGPTAIG-TKSSMMGAGAATPGLTRP 30
+GS+ MA P G K++ +G GA+ PG +P
Sbjct: 379 IGSSRKGMADPIMAGDVKTNNLGVGASAPGEVKP 412
>At5g14690.1 68418.m01721 expressed protein predicted protein,
Arabidopsis thaliana
Length = 217
Score = 27.1 bits (57), Expect = 6.3
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = -1
Query: 141 RSD*NGLELIYDGRSDSDRYKVVDDGSRCGNAGTHQALSRAGDSNGH 1
R + NG + Y + R++ ++G +CG G GD + H
Sbjct: 108 RGNINGEDEFYHHNNHHRRFETAEEGEKCGCGGGGGGCYGGGDYDDH 154
>At2g25980.1 68415.m03120 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 449
Score = 27.1 bits (57), Expect = 6.3
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 219 GSNGDRYELVDDGRPNGDRFEFVDNGRSD*NGLELIYD 106
GS GD E DDG +G R +V G + ++ +YD
Sbjct: 308 GSGGDGGESWDDGAFDGVRKIYVGQGENGIASVKFVYD 345
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 26.6 bits (56), Expect = 8.4
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -2
Query: 365 NDNHGLWDNGIDTGSGDNRGRASLVDVQNDL----HERSAVATGARGGLSTIAGPTEI 204
+DN GL + G + + + AS +D+QN + ER A A LS +A +I
Sbjct: 152 SDNRGLNEGGDNVDAASSGKEASALDLQNRILKMREERKKKAEDASDALSWVARSRKI 209
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 26.6 bits (56), Expect = 8.4
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Frame = +1
Query: 40 SPGVAAPAPIIDDFVPIAVGPAIIDEFEPIS-VGPAIVNEFEPISVRPAIVDEFVPISVG 216
SPG + P+P I PI V P S P+ PI P PIS G
Sbjct: 515 SPGGSPPSPSISPSPPITVPSPPSTPTSPGSPPSPSSPTPSSPIPSPPTPSTPPTPISPG 574
Query: 217 ---PAIVDNPP 240
P I+ +PP
Sbjct: 575 QNSPPIIPSPP 585
>At2g01760.1 68415.m00106 two-component responsive regulator family
protein / response regulator family protein similar to
response regulator 9 (GI:14189890) [Zea mays]; similar
to ARR1 protein (GI:4210449) [Arabidopsis thaliana];
contains Pfam profile: PF00072 response regulator
receiver domain
Length = 382
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = -2
Query: 407 IDNNHGLSYDFGFVNDNHGLWDN---GIDTGSGDNR 309
IDN+H S+ NDN G N +D S NR
Sbjct: 299 IDNHHSASFGVWIPNDNLGRSQNEHFSVDVSSASNR 334
>At1g70740.1 68414.m08154 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 425
Score = 26.6 bits (56), Expect = 8.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -2
Query: 221 AGPTEIGTNSSTMAGLTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSS 72
+G +GT S+T + GSN T G G+ +S A + T+S+
Sbjct: 360 SGAASLGTLSTTGSSTDSFGSNLNTNTGTGVRGTPASSKASTRSNATRSA 409
>At1g47320.1 68414.m05239 expressed protein similar to putative
non-LTR retroelement reverse transcriptase GB:AAD21515
GI:4510429 from [Arabidopsis thaliana]; expression
supported by MPSS
Length = 259
Score = 26.6 bits (56), Expect = 8.4
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2
Query: 416 DGSIDNNHGLSYDFGFVNDNHGLWDNGIDTGSG 318
DG+ N GL+ G + DN G W G G
Sbjct: 106 DGASRGNPGLATAGGVLQDNEGRWCGGFSLNIG 138
>At1g27950.1 68414.m03424 lipid transfer protein-related low
similarity to lipid transfer protein Picea abies
GI:2627141; contains Pfam profile: PF00234: Protease
inhibitor/seed storage/LTP family
Length = 193
Score = 26.6 bits (56), Expect = 8.4
Identities = 16/70 (22%), Positives = 29/70 (41%)
Frame = -2
Query: 275 LHERSAVATGARGGLSTIAGPTEIGTNSSTMAGLTEIGSNSLTMAGPTEMGSNSSMMAGP 96
LH S G+S + + TN++T + G + T A T+ G ++S G
Sbjct: 108 LHNASITNCPKLLGISPSSPDAAVFTNNATTTPVAPAGKSPATPATSTDKGGSASAKDGH 167
Query: 95 TAIGTKSSMM 66
+ ++M
Sbjct: 168 AVVALAVALM 177
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,345,664
Number of Sequences: 28952
Number of extensions: 175782
Number of successful extensions: 771
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 791932800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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