Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0512
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81050-6|CAB02856.1|  713|Caenorhabditis elegans Hypothetical pr...   104   6e-23
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical...    29   2.7  
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical...    29   2.7  
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ...    28   6.2  
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ...    28   6.2  

>Z81050-6|CAB02856.1|  713|Caenorhabditis elegans Hypothetical
           protein C50B6.7 protein.
          Length = 713

 Score =  104 bits (250), Expect = 6e-23
 Identities = 44/77 (57%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
 Frame = +2

Query: 26  RSVNVHLFEWKWNDIADECERFLGPRGFGGIQISPPNENVVLWTYNR-PWWERYQPISYE 202
           R   VHLFEWKW D+A ECE FL   G+G +Q+SPP E++  +  N  PWW RYQP+SY+
Sbjct: 31  RQTMVHLFEWKWADVAKECENFLQYYGYGAVQVSPPMEHLKAFPNNNYPWWVRYQPVSYK 90

Query: 203 LVTRSGNERQFADMVRR 253
           L +RSGNE++F DMV R
Sbjct: 91  LDSRSGNEQEFQDMVNR 107



 Score = 73.3 bits (172), Expect = 2e-13
 Identities = 37/82 (45%), Positives = 48/82 (58%)
 Frame = +3

Query: 510 RNMIVNFMNKLIDLGVAGFRIDAAKHMWPEDXXXXXXXXXXXXTAHGFPSNARPYIYQEV 689
           R  IV ++NKL+D+GVAGFR DA+KHMWP+D             +  + SN RP+   EV
Sbjct: 202 RAKIVAYLNKLVDMGVAGFRHDASKHMWPQD-ILNILNDVKDLRSDIYGSNQRPFAVHEV 260

Query: 690 IDYGGEAISRDEYTPIGAVTEF 755
           ID GGEA+   +Y   G  T F
Sbjct: 261 IDRGGEAVKCGDYFGNGRYTNF 282



 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 8/90 (8%)
 Frame = +1

Query: 256 NAAGVRIYVDAVINHMTG---EPPENIGTAGNTA---VYREWYYPAVPYRAEHFNWPHCV 417
           N  GVRI VD V+NHM G   +    +G++G+++    +    +P VPY    FN P C 
Sbjct: 109 NKVGVRIIVDIVMNHMVGIGQKSGNGVGSSGSSSFDGTHGVQSFPGVPYSLGDFNNPKCD 168

Query: 418 --IDGSDYVNDALRVRNCELVGLKDLNQAN 501
             I GSDY N A  V++C LVGL DLNQA+
Sbjct: 169 GDIQGSDYQNSAEHVKDCRLVGLLDLNQAS 198


>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
           protein Y43F8B.3b protein.
          Length = 1398

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +1

Query: 316 PENIGTAGNTAVYREWYYPAVPYRAEHFNWPHCVIDGSDYVNDALRVRNCE 468
           P  IGT G   + R WYY  V  R E F W  C  +G+++         CE
Sbjct: 79  PRQIGT-GPYRIPR-WYYNPVRGRCELFYWSGCCGNGNNFQTFQTCQSTCE 127


>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
           protein Y43F8B.3a protein.
          Length = 1816

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 18/51 (35%), Positives = 23/51 (45%)
 Frame = +1

Query: 316 PENIGTAGNTAVYREWYYPAVPYRAEHFNWPHCVIDGSDYVNDALRVRNCE 468
           P  IGT G   + R WYY  V  R E F W  C  +G+++         CE
Sbjct: 79  PRQIGT-GPYRIPR-WYYNPVRGRCELFYWSGCCGNGNNFQTFQTCQSTCE 127


>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
           protein Y46G5A.6 protein.
          Length = 1002

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 188 PISYELVTRSGNERQFADMVRRSMLLEL 271
           P  Y++VTR G ER +  MVR  ++ E+
Sbjct: 384 PEKYDVVTRKGGERAYNQMVRLLIIDEI 411


>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
           protein Y46G5A.4 protein.
          Length = 2145

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 188 PISYELVTRSGNERQFADMVRRSMLLEL 271
           P  Y++VTR G ER +  MVR  ++ E+
Sbjct: 584 PEKYDVVTRKGGERAYNQMVRLLIIDEI 611


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,776,114
Number of Sequences: 27780
Number of extensions: 384471
Number of successful extensions: 920
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)