Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0512
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.           129   3e-32
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    29   0.047
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    27   0.14 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.1  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   5.4  
AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor pr...    22   7.1  
AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor pr...    22   7.1  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score =  129 bits (311), Expect = 3e-32
 Identities = 54/83 (65%), Positives = 63/83 (75%)
 Frame = +2

Query: 5   NPHYVTGRSVNVHLFEWKWNDIADECERFLGPRGFGGIQISPPNENVVLWTYNRPWWERY 184
           +PH+  G    VHLFEWKWNDIA ECE+FLGP GFGG+Q+SP  EN+V+    RPWWERY
Sbjct: 23  DPHFAPGHDAIVHLFEWKWNDIAKECEQFLGPVGFGGVQVSPVQENIVI--DKRPWWERY 80

Query: 185 QPISYELVTRSGNERQFADMVRR 253
           QPISY+ +TRSG   QF DMV R
Sbjct: 81  QPISYKWITRSGTREQFIDMVAR 103



 Score =  107 bits (256), Expect = 1e-25
 Identities = 47/82 (57%), Positives = 59/82 (71%)
 Frame = +3

Query: 510 RNMIVNFMNKLIDLGVAGFRIDAAKHMWPEDXXXXXXXXXXXXTAHGFPSNARPYIYQEV 689
           R+ +V+F+N L+ +GVAGFR+DAAKHMWP D              HGFP++A+PYI+QEV
Sbjct: 186 RSKLVDFLNDLVAIGVAGFRVDAAKHMWPSDLRTIYSRVRNLNRTHGFPNDAQPYIFQEV 245

Query: 690 IDYGGEAISRDEYTPIGAVTEF 755
           IDYG EAIS+ EY  IGAV EF
Sbjct: 246 IDYGNEAISKREYNGIGAVIEF 267



 Score = 79.4 bits (187), Expect = 3e-17
 Identities = 39/84 (46%), Positives = 54/84 (64%)
 Frame = +1

Query: 256 NAAGVRIYVDAVINHMTGEPPENIGTAGNTAVYREWYYPAVPYRAEHFNWPHCVIDGSDY 435
           N AGVRIYVD ++NHM+G+  +  GT  + A    + YP VPY  ++F+ P C ++    
Sbjct: 105 NKAGVRIYVDVIMNHMSGDRNDAHGTGNSRANTYNFDYPQVPYTVKNFH-PRCAVNN--- 160

Query: 436 VNDALRVRNCELVGLKDLNQANEH 507
            ND   VRNCELVGL DL+Q+ E+
Sbjct: 161 YNDPSNVRNCELVGLHDLDQSQEY 184


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 29.1 bits (62), Expect = 0.047
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +3

Query: 510 RNMIVNFMNKLIDLGVAGFRIDAAKHMW 593
           R  + N M   +D G+ GFRIDA  H++
Sbjct: 209 REEMKNIMKFWLDKGIDGFRIDAVPHLF 236


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = +3

Query: 510 RNMIVNFMNKLIDLGVAGFRIDAAKHMWPE 599
           +N++  +MN+    GV GFRIDA  HM+ +
Sbjct: 206 KNVLTFWMNR----GVDGFRIDAINHMFED 231


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/46 (28%), Positives = 20/46 (43%)
 Frame = -2

Query: 225 SFPERVTSSYEIGWYLSHQGLLYVHSTTFSLGGDICIPPKPLGPKN 88
           S PE  +   E+GW+  +     + ST+ S  G     P P  P +
Sbjct: 55  SGPEESSGGVELGWF--NDSAAAITSTSPSYPGGGSSSPSPSSPSS 98


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 143 VVLWTYNRPW 172
           V++WTY  PW
Sbjct: 167 VLIWTYTIPW 176


>AY340960-1|AAQ16586.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -3

Query: 743 STNRSVLVPTDCLTAVVNDFLIDVGPSVGRKAVGSVKIVQTIVNNKQIL 597
           S   S+ V  +    VV+     V   V    V +V + QT+VN  QIL
Sbjct: 23  SAKTSISVKGESNVDVVSQINSLVSSIVSGANVSAVLLAQTLVNILQIL 71


>AY055108-1|AAL15544.1|   78|Apis mellifera apisimin precursor
           protein.
          Length = 78

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -3

Query: 743 STNRSVLVPTDCLTAVVNDFLIDVGPSVGRKAVGSVKIVQTIVNNKQIL 597
           S   S+ V  +    VV+     V   V    V +V + QT+VN  QIL
Sbjct: 23  SAKTSISVKGESNVDVVSQINSLVSSIVSGANVSAVLLAQTLVNILQIL 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,853
Number of Sequences: 438
Number of extensions: 5059
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)