Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0511
         (784 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8II15 Cluster: Putative uncharacterized protein; n=1; ...    37   0.65 
UniRef50_A0CPS4 Cluster: Chromosome undetermined scaffold_23, wh...    33   6.1  
UniRef50_Q8EMD7 Cluster: Hypothetical conserved protein; n=1; Oc...    33   8.1  
UniRef50_Q12Y36 Cluster: Putative uncharacterized protein precur...    33   8.1  

>UniRef50_Q8II15 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 682

 Score = 36.7 bits (81), Expect = 0.65
 Identities = 22/79 (27%), Positives = 38/79 (48%)
 Frame = +3

Query: 198 QASLLLYNYYYRIDRDSQFTLSLNNLTDRKVFKLVSILYEQEKDE**HFKKGVSYPKTIW 377
           Q+    YN   +I+RD   T  LN    +K+ K+  ILYE E++   +    + Y   ++
Sbjct: 355 QSKTTCYNLINKIERDIYKTFKLNISKKKKINKIKKILYENEEENIHNIFNHICYENLLF 414

Query: 378 ESLIYLDYLFVFYKHEHLL 434
           +   Y ++ F   K E +L
Sbjct: 415 KGYFYNNH-FSNNKKEQIL 432


>UniRef50_A0CPS4 Cluster: Chromosome undetermined scaffold_23, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_23,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 235

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 524 RNIKCVSQNNCCRICINWHFLP 459
           RNIKC S+ NCC  C+N    P
Sbjct: 205 RNIKCTSKCNCCEECVNQEIQP 226


>UniRef50_Q8EMD7 Cluster: Hypothetical conserved protein; n=1;
           Oceanobacillus iheyensis|Rep: Hypothetical conserved
           protein - Oceanobacillus iheyensis
          Length = 337

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
 Frame = +1

Query: 250 NLHYHSIT*PIAKFLNW*AFCMNKKKTSDSILKKGSLTQ-KQFGN 381
           N  + SIT PI ++++  A+C   K+T D + KK +L+  ++FG+
Sbjct: 52  NNRWESITVPIPEYIDLNAYCYKYKETIDYLKKKSTLSSPRRFGS 96


>UniRef50_Q12Y36 Cluster: Putative uncharacterized protein
           precursor; n=2; Methanococcoides burtonii DSM 6242|Rep:
           Putative uncharacterized protein precursor -
           Methanococcoides burtonii (strain DSM 6242)
          Length = 401

 Score = 33.1 bits (72), Expect = 8.1
 Identities = 13/48 (27%), Positives = 29/48 (60%)
 Frame = +3

Query: 171 CVILLFISHQASLLLYNYYYRIDRDSQFTLSLNNLTDRKVFKLVSILY 314
           C++++ ++   ++L Y    R D+D + ++ LNN++ +KV   V I +
Sbjct: 68  CLVIIVVNFIGAVLYYYLVKRKDQDEKESIDLNNISQKKVIISVLIFF 115


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,107,227
Number of Sequences: 1657284
Number of extensions: 13657771
Number of successful extensions: 26006
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26000
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)