Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0511
         (784 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023492-1|AAY84892.1|  405|Drosophila melanogaster RE20268p pro...    29   7.2  
AE014297-355|AAF51953.1|  405|Drosophila melanogaster CG2051-PB,...    29   7.2  
AE014297-354|AAN14322.1|  405|Drosophila melanogaster CG2051-PA,...    29   7.2  

>BT023492-1|AAY84892.1|  405|Drosophila melanogaster RE20268p
           protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 240 RDSQFTLSLNNLTDRKVFKLVSILYEQEKDE 332
           R+++  L LN L  RKV++L+ + Y   KDE
Sbjct: 302 REAREALKLNPLQVRKVYELLRLFYTNVKDE 332


>AE014297-355|AAF51953.1|  405|Drosophila melanogaster CG2051-PB,
           isoform B protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 240 RDSQFTLSLNNLTDRKVFKLVSILYEQEKDE 332
           R+++  L LN L  RKV++L+ + Y   KDE
Sbjct: 302 REAREALKLNPLQVRKVYELLRLFYTNVKDE 332


>AE014297-354|AAN14322.1|  405|Drosophila melanogaster CG2051-PA,
           isoform A protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 240 RDSQFTLSLNNLTDRKVFKLVSILYEQEKDE 332
           R+++  L LN L  RKV++L+ + Y   KDE
Sbjct: 302 REAREALKLNPLQVRKVYELLRLFYTNVKDE 332


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,870,561
Number of Sequences: 53049
Number of extensions: 603613
Number of successful extensions: 927
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)