Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0510
         (770 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    27   0.15 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.2  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   5.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   7.3  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -3

Query: 570 IKQSTFYV*LSFMNHNRAYKNVYEFVTAFYQCNN 469
           + Q+ +Y  LS  +HN  Y N  +FV + YQ NN
Sbjct: 259 LTQNLYYSALS--SHNLNYVNTEQFVKSQYQANN 290


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 601 ISILVSAIQKYDRILHV*KLCFNYDLINIIYYVN 702
           IS  V + +K D+IL+  + C    LIN   Y+N
Sbjct: 269 ISDFVGSCRKTDQILYFIRGCLQTYLINASTYLN 302


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 601 ISILVSAIQKYDRILHV*KLCFNYDLINIIYYVN 702
           IS  V + +K D+IL+  + C    LIN   Y+N
Sbjct: 307 ISDFVGSCRKTDQILYFIRGCLQTYLINASTYLN 340


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +2

Query: 278 HDDPNVRYEALLAVQKLMVHNWEYLGKQLEKEQID 382
           H+D  +RY    +V      ++ YL ++LE+  +D
Sbjct: 275 HNDGRLRYWRTPSVVVSDYSDYSYLDEKLERNDLD 309


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +2

Query: 338 NWEYLGKQLEKEQIDKQAGTVVGAK 412
           +W Y G Q++ + + ++AG+ + AK
Sbjct: 178 SWTYNGAQVDLKHMKQEAGSNLVAK 202


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -3

Query: 447 LIYNVMS*KIYALAPTTVPACLSICSFSSCLPRYS 343
           L+YN+MS K        +P C    S     PR S
Sbjct: 346 LLYNIMSNKFREAFKLMLPNCCGKWSSQKSEPRRS 380


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,092
Number of Sequences: 438
Number of extensions: 4859
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)