Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0509
(780 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 140 5e-32
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 138 1e-31
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 132 9e-30
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 108 1e-22
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 107 4e-22
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 105 2e-21
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 103 4e-21
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 93 7e-18
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 89 2e-16
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 87 4e-16
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 86 1e-15
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 82 2e-14
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 81 3e-14
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 77 7e-13
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 76 9e-13
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 75 3e-12
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 73 6e-12
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 71 3e-11
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 68 2e-10
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 64 5e-09
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 62 1e-08
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 62 1e-08
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 61 3e-08
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 61 3e-08
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 60 6e-08
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 60 8e-08
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 58 2e-07
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 54 5e-06
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 53 7e-06
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 53 7e-06
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 53 9e-06
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 52 1e-05
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 52 1e-05
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 2e-04
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 47 6e-04
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 46 0.001
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 46 0.001
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 45 0.002
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 43 0.010
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 42 0.017
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 40 0.053
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 40 0.053
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 39 0.12
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 39 0.16
UniRef50_A4AHE7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.28
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 38 0.37
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 37 0.65
UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=... 37 0.65
UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein ... 36 1.5
UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1; Filob... 35 2.0
UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3; ... 35 2.6
UniRef50_Q4RSU0 Cluster: Chromosome 12 SCAF14999, whole genome s... 34 3.5
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 34 3.5
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 34 3.5
UniRef50_Q01NQ2 Cluster: Pyrrolo-quinoline quinone precursor; n=... 34 4.6
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 34 4.6
UniRef50_A7I648 Cluster: Putative uncharacterized protein; n=1; ... 34 4.6
UniRef50_A0CZG7 Cluster: Chromosome undetermined scaffold_32, wh... 33 6.1
UniRef50_UPI00006D0E10 Cluster: hypothetical protein TTHERM_0007... 33 8.0
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 33 8.0
UniRef50_A2FSF9 Cluster: 14-3-3 protein; n=1; Trichomonas vagina... 33 8.0
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 140 bits (338), Expect = 5e-32
Identities = 66/85 (77%), Positives = 72/85 (84%)
Frame = +1
Query: 256 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 435
L+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP V +PA NT
Sbjct: 69 LENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNT 128
Query: 436 GLGPEKTSFFQALSIPTKISKGTIE 510
GLGPEKTSFFQAL I TKIS+GTIE
Sbjct: 129 GLGPEKTSFFQALGITTKISRGTIE 153
Score = 125 bits (301), Expect = 1e-27
Identities = 56/66 (84%), Positives = 64/66 (96%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 233 MRKAIK 250
MRKAI+
Sbjct: 61 MRKAIR 66
Score = 120 bits (289), Expect = 4e-26
Identities = 55/88 (62%), Positives = 73/88 (82%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
+G I++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 149 RGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITE 208
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTIAS 758
E L ++F GV NVA++ L IGYPT+AS
Sbjct: 209 ETLHSRFLEGVRNVASVCLQIGYPTVAS 236
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 138 bits (335), Expect = 1e-31
Identities = 66/85 (77%), Positives = 72/85 (84%)
Frame = +1
Query: 256 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 435
L+NNPALE+LLPHI+GNVGFVFT+ DL EVRD LL NKV A AR GAIAP V +PA NT
Sbjct: 69 LENNPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNT 128
Query: 436 GLGPEKTSFFQALSIPTKISKGTIE 510
GLGPEKTSFFQAL I TKIS+GTIE
Sbjct: 129 GLGPEKTSFFQALGITTKISRGTIE 153
Score = 121 bits (292), Expect = 2e-26
Identities = 54/66 (81%), Positives = 63/66 (95%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 233 MRKAIK 250
MRKAI+
Sbjct: 61 MRKAIR 66
Score = 118 bits (283), Expect = 2e-25
Identities = 54/91 (59%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLN---ISPFSYGLVVKQVYDSGTIFAPEILD 665
+G I++DV ++KPGDKVGASEATLLNMLN ISPFSYGL+++QVYD+G++++PE+LD
Sbjct: 149 RGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVYDNGSVYSPEVLD 208
Query: 666 IKPEDLRAKFQAGVANVAALSLAIGYPTIAS 758
I + L +F GV N+A++ L IGYPT+AS
Sbjct: 209 ITEDALHKRFLKGVRNIASVCLQIGYPTLAS 239
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 132 bits (319), Expect = 9e-30
Identities = 61/98 (62%), Positives = 78/98 (79%)
Frame = +1
Query: 217 GKKHNDAQSHQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 396
GK ++ + L+ NP LEK+LPH+KGN+GFVFT D+V++R+ +L N+V APA+ GA
Sbjct: 56 GKNTTIRKALRGHLEQNPNLEKVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGA 115
Query: 397 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIE 510
IAP+ V +PA NTGLGPEKTSFFQALSI TKIS+GTIE
Sbjct: 116 IAPVDVFVPASNTGLGPEKTSFFQALSIATKISRGTIE 153
Score = 118 bits (284), Expect = 2e-25
Identities = 55/88 (62%), Positives = 72/88 (81%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
+G I+++VH++K G+KVGASEATLL ML I PF+YGL + QVYDSG++FAP ILDI
Sbjct: 149 RGTIEILSEVHLIKIGEKVGASEATLLQMLKIFPFTYGLKIVQVYDSGSVFAPSILDITE 208
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTIAS 758
+DL +F +G+ANVAA+SL IGYPT+AS
Sbjct: 209 DDLIKQFMSGLANVAAVSLQIGYPTVAS 236
Score = 98.3 bits (234), Expect = 2e-19
Identities = 42/66 (63%), Positives = 54/66 (81%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 233 MRKAIK 250
+RKA++
Sbjct: 61 IRKALR 66
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 108 bits (260), Expect = 1e-22
Identities = 52/89 (58%), Positives = 67/89 (75%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
KG II V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F PE+L++
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLNLTE 211
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTIASA 761
+DL KF AGV+ + ALSLAI YPT+A+A
Sbjct: 212 DDLVEKFAAGVSMITALSLAISYPTVAAA 240
Score = 103 bits (246), Expect = 7e-21
Identities = 48/85 (56%), Positives = 63/85 (74%)
Frame = +1
Query: 265 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 444
N A LLP ++GNVG +FT+GDL EV +++ + KV APAR G +AP+ VV+ NTGL
Sbjct: 75 NQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLD 134
Query: 445 PEKTSFFQALSIPTKISKGTIESST 519
P +TSFFQ L+IPTKI+KGT+E T
Sbjct: 135 PSQTSFFQVLNIPTKINKGTVEIIT 159
Score = 72.1 bits (169), Expect = 1e-11
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = +2
Query: 68 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 247
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 248 K 250
+
Sbjct: 67 R 67
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 107 bits (256), Expect = 4e-22
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = +1
Query: 259 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 438
+ P LE+LLPHIKGNVGF+FT+GDL +++ KL E K +PA+ G IAP V++PA +TG
Sbjct: 77 ETQPELEELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPNDVIVPAGDTG 136
Query: 439 LGPEKTSFFQALSIPTKISKGTIE 510
L P +T+F QAL+I +KI+KG IE
Sbjct: 137 LDPTQTNFVQALNIASKITKGQIE 160
Score = 79.0 bits (186), Expect = 1e-13
Identities = 38/88 (43%), Positives = 54/88 (61%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
KG I ++ ++K G+KVG S+A LL L I+PF YG V+ VYD+G ++ + LD+
Sbjct: 156 KGQIEITSETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDVVYDNGIVYDAKALDLTE 215
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTIAS 758
D+ KFQ GV A+SLA PT A+
Sbjct: 216 SDIVKKFQEGVQAATAISLAANLPTEAA 243
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG+ +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 233 MRKAIKDPWTTIQP 274
+RKAIK+ T QP
Sbjct: 68 IRKAIKNQAET-QP 80
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 105 bits (251), Expect = 2e-21
Identities = 48/89 (53%), Positives = 67/89 (75%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
KG II V ++K GDKVG+SEA LL L I PFSYGLVV+ VYD+G++F+PE+LD+
Sbjct: 151 KGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTE 210
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTIASA 761
+ L KF +G++ V +L+LA+ YPT+A+A
Sbjct: 211 DQLVEKFASGISMVTSLALAVSYPTLAAA 239
Score = 103 bits (248), Expect = 4e-21
Identities = 48/85 (56%), Positives = 64/85 (75%)
Frame = +1
Query: 265 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 444
N A+ LLP ++GNVG +FT+GDL EV +++ + KV APAR G +AP+ VV+ NTGL
Sbjct: 74 NTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLD 133
Query: 445 PEKTSFFQALSIPTKISKGTIESST 519
P +TSFFQ L+IPTKI+KGT+E T
Sbjct: 134 PSQTSFFQVLNIPTKINKGTVEIIT 158
Score = 75.4 bits (177), Expect = 2e-12
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 233 MRKAIK 250
M+++++
Sbjct: 61 MKRSVR 66
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 103 bits (248), Expect = 4e-21
Identities = 50/88 (56%), Positives = 65/88 (73%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
+G I+N+VHI+K G KVGASEATLL LNI PF+YGL K +YD+G ++P I +
Sbjct: 148 RGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYDAGACYSPSISE--- 204
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTIAS 758
EDL KF+ G+ N+AA+SL IGYPT+AS
Sbjct: 205 EDLINKFKQGIFNIAAISLEIGYPTVAS 232
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 259 DNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 438
D+ P L+ L ++K N +F + ++ EV+ + +V APA+ G AP V+IPA TG
Sbjct: 69 DSKPELDALNTYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTG 128
Query: 439 LGPEKTSFFQALSIPTKISKGTIE 510
+ P +TSF Q L I TKI++G I+
Sbjct: 129 MEPTQTSFLQDLKIATKINRGQID 152
Score = 56.8 bits (131), Expect = 6e-07
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = +2
Query: 80 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKD 253
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRD 66
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 93.1 bits (221), Expect = 7e-18
Identities = 43/89 (48%), Positives = 61/89 (68%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
KG I+N++H++ KVG SEA LL L + PFS+GL VK VYD+G++++ E+L +
Sbjct: 159 KGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFSFGLKVKNVYDNGSVYSAEVLKLTN 218
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTIASA 761
+ L KF GV N+AA+SL +G PT ASA
Sbjct: 219 DILLGKFMNGVRNIAAMSLTLGIPTAASA 247
Score = 73.7 bits (173), Expect = 5e-12
Identities = 39/93 (41%), Positives = 54/93 (58%)
Frame = +1
Query: 232 DAQSHQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 411
D + + P LE L+P ++GNV +F ++ EV + E+KV A A+ G IAP
Sbjct: 71 DFEKRKNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPND 130
Query: 412 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIE 510
V + TG+ P +TSFFQAL I TKI KG I+
Sbjct: 131 VHVYPGPTGMDPSQTSFFQALGIFTKIVKGQID 163
Score = 54.4 bits (125), Expect = 3e-06
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +2
Query: 80 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 250
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLK 59
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 88.6 bits (210), Expect = 2e-16
Identities = 47/99 (47%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Frame = +1
Query: 217 GKKHNDAQSHQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA-PARPG 393
GK + ++ L P +EKLLP +K N+GFVF + DL E+R+ +L+NK + PAR G
Sbjct: 56 GKNTRIRTALKKNLQAVPQIEKLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLG 115
Query: 394 AIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIE 510
IAP+ V IP TG+ P TSF ++L I TKI KG IE
Sbjct: 116 VIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIE 154
Score = 85.0 bits (201), Expect = 2e-15
Identities = 46/88 (52%), Positives = 58/88 (65%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
KG I VH++K G+KV AS ATLL N++P SYG+ V+ VYD G I+ ++LDI
Sbjct: 150 KGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYDDGVIYDAKVLDITD 208
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTIAS 758
ED+ KF GV+NVAALS A G T AS
Sbjct: 209 EDILEKFSKGVSNVAALSRATGVITEAS 236
Score = 64.1 bits (149), Expect = 4e-09
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 233 MRKAIK 250
+R A+K
Sbjct: 61 IRTALK 66
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 87.4 bits (207), Expect = 4e-16
Identities = 43/90 (47%), Positives = 57/90 (63%)
Frame = +3
Query: 492 FKGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIK 671
FKG I + ++ G KVGASEA +LN+L I PF Y L ++ +YD G ++ P IL I
Sbjct: 150 FKGTIEITGEKQLIWEGQKVGASEANILNILGIMPFKYTLKIEALYDHGNMYDPSILAIT 209
Query: 672 PEDLRAKFQAGVANVAALSLAIGYPTIASA 761
E L KF+ G+ NV L+LA+GYP ASA
Sbjct: 210 EEVLGEKFRTGLRNVTGLALAVGYPCAASA 239
Score = 59.7 bits (138), Expect = 8e-08
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +1
Query: 268 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 447
P + +L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T + P
Sbjct: 75 PGIRQLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRTSMSP 134
Query: 448 EKTSFFQALSIPTKISKGTIE 510
AL+I KI KGTIE
Sbjct: 135 NDIKILHALNIQCKIFKGTIE 155
Score = 37.9 bits (84), Expect = 0.28
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 80 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSI-VLMGKNTMMRKAI 247
K +Y K+ L +Y K +V + NV + Q+ IR L VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAV 67
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 85.8 bits (203), Expect = 1e-15
Identities = 48/104 (46%), Positives = 68/104 (65%)
Frame = +1
Query: 199 LQYRAHGKKHNDAQSHQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQA 378
++ RA KK A ++ + L N +KLL GN +FT ++ + L +++VQA
Sbjct: 63 VERRAEDKK---ASAYDKLLYNTCIEKKLLC---GNTALIFTNEEIPVITAVLDKHRVQA 116
Query: 379 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIE 510
PAR GAIAP V++PA NTG+ P+ TSFFQAL+I TKI+KGT+E
Sbjct: 117 PARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVE 160
Score = 72.5 bits (170), Expect = 1e-11
Identities = 39/88 (44%), Positives = 53/88 (60%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
KG I++D +L GD+V S ATLL L+ISPF Y + V+ V+D G +F E L I
Sbjct: 156 KGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWDRGMLFLREDLSITD 215
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTIAS 758
+ + G++NVAALSL G PT A+
Sbjct: 216 DVVEKYLLEGISNVAALSLGAGIPTAAT 243
Score = 38.3 bits (85), Expect = 0.21
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 80 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIK 250
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVE 64
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 81.8 bits (193), Expect = 2e-14
Identities = 40/99 (40%), Positives = 62/99 (62%)
Frame = +1
Query: 220 KKHNDAQSHQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAI 399
+ +D + + P +E L+ +KGN+G +FT DL +++D + + +APAR G++
Sbjct: 75 ESESDFEERSKTWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSV 134
Query: 400 APLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIESS 516
A V I A TGL P++T+FFQ L+IPTKI+K IE S
Sbjct: 135 AQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAKAQIEIS 173
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/81 (46%), Positives = 55/81 (67%)
Frame = +3
Query: 519 DVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQ 698
D I+ G+KVG++EA LL LNI+PFSY L V V+D+G ++ P +LDI E + ++
Sbjct: 175 DKQIITEGEKVGSNEAALLQKLNINPFSYKLSVAHVFDNGNVYGPGVLDITSESIIESYK 234
Query: 699 AGVANVAALSLAIGYPTIASA 761
++NVA++SL G PT ASA
Sbjct: 235 RVISNVASVSLESGIPTRASA 255
Score = 50.4 bits (115), Expect = 5e-05
Identities = 21/67 (31%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNT 229
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR +S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 230 MMRKAIK 250
+++ A++
Sbjct: 61 LIKAALQ 67
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/79 (48%), Positives = 51/79 (64%)
Frame = +1
Query: 274 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 453
L+ L + G VGF+FT + +++ + ENKV+ PAR GA+AP+ VVIP TG+ P
Sbjct: 93 LDALKNSVAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPAS 152
Query: 454 TSFFQALSIPTKISKGTIE 510
FF AL IPTKI KG I+
Sbjct: 153 IQFFHALQIPTKIEKGQIQ 171
Score = 71.7 bits (168), Expect = 2e-11
Identities = 39/89 (43%), Positives = 51/89 (57%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
KG I D +LK G KVG S+A LL L PF YG+ V YD+G+I + + +
Sbjct: 167 KGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACYDNGSILNKQQVSVNL 226
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTIASA 761
D+ AKFQ V NV+A+SL G+ ASA
Sbjct: 227 NDIVAKFQQNVRNVSAISLQNGWVNEASA 255
Score = 54.0 bits (124), Expect = 4e-06
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQI-RISLRGSSIVLMGKNT 229
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q I RI + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 230 MMRKAI 247
+ +K +
Sbjct: 61 LFKKVL 66
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 76.6 bits (180), Expect = 7e-13
Identities = 49/93 (52%), Positives = 58/93 (62%)
Frame = +3
Query: 480 PYQDFKGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 659
P + KG IINDV ILK GDK+ +QVY G+IF+P+I
Sbjct: 742 PIKISKGTIEIINDVPILKSGDKI----------------------EQVY--GSIFSPDI 777
Query: 660 LDIKPEDLRAKFQAGVANVAALSLAIGYPTIAS 758
LDIKPEDLRAKFQ GVAN+A +SL IGYPT+AS
Sbjct: 778 LDIKPEDLRAKFQVGVANLAGVSLEIGYPTLAS 810
Score = 62.1 bits (144), Expect(2) = 5e-11
Identities = 29/39 (74%), Positives = 33/39 (84%)
Frame = +1
Query: 256 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 372
L+ N L KLLPHIK VGFVFT+GDLVEVRDKL+E+KV
Sbjct: 699 LEVNSDLRKLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 28.3 bits (60), Expect(2) = 5e-11
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 469 ALSIPTKISKGTIE 510
ALSIP KISKGTIE
Sbjct: 738 ALSIPIKISKGTIE 751
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 76.2 bits (179), Expect = 9e-13
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
KG II+ +L GDKVG S+A LL MLNI PF Y + + Q+Y+ G I+ ++DI
Sbjct: 171 KGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYEDGVIYDSSLIDIGE 230
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTIAS 758
ED+ + ++ VAA SL G T AS
Sbjct: 231 EDIFTSLRNAISTVAAASLGAGVITQAS 258
Score = 66.5 bits (155), Expect = 7e-10
Identities = 34/86 (39%), Positives = 54/86 (62%)
Frame = +1
Query: 268 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 447
P L + +KG+V FVF +G+ +++ + EN +A A+ G +A V + + TG+ P
Sbjct: 95 PELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTP 154
Query: 448 EKTSFFQALSIPTKISKGTIESSTMY 525
+KTS+FQAL I TKI+KG +E + Y
Sbjct: 155 DKTSYFQALGIATKITKGKVEIISPY 180
Score = 41.5 bits (93), Expect = 0.023
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +2
Query: 53 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 232
M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 233 MRKAIKD 253
+R+AI D
Sbjct: 85 IRRAIAD 91
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 74.5 bits (175), Expect = 3e-12
Identities = 40/80 (50%), Positives = 46/80 (57%)
Frame = -2
Query: 506 IVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 327
+VP ILVG +AWKKEV G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 326 RVNTKPTLPLMCGNSFSRAG 267
V TKPTLPL GN+FS++G
Sbjct: 61 LVKTKPTLPLTKGNNFSKSG 80
Score = 33.9 bits (74), Expect = 4.6
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1
Query: 249 LMALRIIVFFPMSTILEPRSEXXXXXXXCEPTLSAPTMKHFGYSSKSWMILTK 91
LMAL +VF P+ T P + E TLS PT YSSK + L K
Sbjct: 87 LMALLTMVFLPIKTTALPLNSFLTSCICWEETLSTPTTNKDLYSSKYSLNLAK 139
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 73.3 bits (172), Expect = 6e-12
Identities = 35/81 (43%), Positives = 48/81 (59%)
Frame = +1
Query: 268 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 447
P L L+PH+K + +VF + ++ K+ V APAR G +A V+IP TG+ P
Sbjct: 91 PQLASLIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDP 150
Query: 448 EKTSFFQALSIPTKISKGTIE 510
+ +FF ALSI TKI KG IE
Sbjct: 151 SQINFFHALSISTKIQKGQIE 171
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/88 (40%), Positives = 47/88 (53%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
KG I +V + G K+G SE +LL +NI PFSYG+ YD+G I E+L I P
Sbjct: 167 KGQIEITKEVQVCTKGKKIGNSEVSLLEKMNIQPFSYGMKCFSDYDNGEILTEEVLSISP 226
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTIAS 758
+ F +AA+SLA GY T S
Sbjct: 227 SVILDAFAQNTLRIAAVSLATGYVTAPS 254
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/62 (40%), Positives = 41/62 (66%)
Frame = +2
Query: 65 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKA 244
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 245 IK 250
++
Sbjct: 67 VQ 68
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/79 (46%), Positives = 48/79 (60%)
Frame = +1
Query: 274 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 453
L+ LLP+IK NV FVFT GD + + K +A A+ G +AP VVI T GP++
Sbjct: 76 LKNLLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEPMLTQSGPDQ 135
Query: 454 TSFFQALSIPTKISKGTIE 510
F+ AL I TKI+KG IE
Sbjct: 136 HGFYAALGIDTKINKGKIE 154
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/86 (37%), Positives = 48/86 (55%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
KG I+N V+++K GD V S ATLL L I PF Y + +YD G I+ +L+I
Sbjct: 150 KGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPFFYAMSALNLYDDGEIYDAAVLEIDD 209
Query: 675 EDLRAKFQAGVANVAALSLAIGYPTI 752
+ AK+ AG+ +L+L +P +
Sbjct: 210 SVMEAKWNAGLEAFVSLALGANFPCL 235
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +2
Query: 68 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 247
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/83 (44%), Positives = 43/83 (51%)
Frame = -1
Query: 510 FNSTL*NLGRDRKSLEERGLLWTEAGVVGGNDD*QWGNGTRTSWSLDFVLQQFVTDLNEV 331
FN T NLG + +SLEER L W GV G N D WGN T + WS + V D+ +
Sbjct: 174 FNGTSGNLGWNTQSLEERSLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQG 233
Query: 330 SAGEHEANVALDVWQQFLEGWIV 262
GE E NV LD QQ W V
Sbjct: 234 IVGEDETNVTLDERQQLFVVWEV 256
Score = 49.6 bits (113), Expect = 9e-05
Identities = 24/79 (30%), Positives = 49/79 (62%)
Frame = -2
Query: 746 WVTNSQRKSSYISNSSLELGTEIFWFDVQNFRCKNSSRIIYLLNNKTI*EWRDVQHVEKG 567
WVT+SQ +S +S E+ + D+Q+ ++ + ++ L + +T+ EWR+VQ V++
Sbjct: 95 WVTSSQGNTSNGVDSRDEVRDQFIVSDIQDGSWEDLTVVVNLNDGQTVGEWRNVQQVQQR 154
Query: 566 GFRSSNLVTGLQDVYIVDD 510
FRS++ +T + D+ + D+
Sbjct: 155 SFRSTDSLTSVNDLNVRDN 173
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 63.7 bits (148), Expect = 5e-09
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Frame = +1
Query: 265 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 444
NP L+P + GNVG +FT+GDL EV +++ + KV APAR G +A + V++P NT L
Sbjct: 15 NPVFLNLVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXLN 74
Query: 445 PEKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPP-FSTC*TSLHSHMVLLLS 621
T PT S+ +I+ + Y P+ + L P + C T V LL
Sbjct: 75 LAHTRASXKPISPT-FSRVSIKMTLHY---QPIKEVALGNTPIIAFCDTDSPMQCVALLL 130
Query: 622 R 624
R
Sbjct: 131 R 131
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 62.5 bits (145), Expect = 1e-08
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Frame = +1
Query: 247 QRPLDNN--PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVI 420
Q+ L+N+ P ++ ++ KG V +FT ++ L +NK+ AR G IA + VV+
Sbjct: 64 QKALENSDIPGMKDMIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVV 123
Query: 421 PAHNTGL--GPEKTSFFQALSIPTKISKGTI 507
PA NTG+ GP T F +A IPTKI +GTI
Sbjct: 124 PAKNTGIAPGPMLTEFKEA-GIPTKIDQGTI 153
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 247 QRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 426
+ LD P LE LL +I+G V F+FT D ++ L E+K APA+PG IAP +V+P
Sbjct: 78 EEKLDERPELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPE 137
Query: 427 HNTGLGPEK-TSFFQALSIPTKISKGTI 507
T P S Q +P +I G +
Sbjct: 138 GPTPFEPGPIVSELQQAGLPAQIQDGKV 165
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +2
Query: 56 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNT 229
G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 230 MMRKAIKD 253
+MR A+++
Sbjct: 72 LMRIALEE 79
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 61.3 bits (142), Expect = 3e-08
Identities = 32/90 (35%), Positives = 48/90 (53%)
Frame = +1
Query: 256 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 435
L N+ ++L I GNV F+FT D +++ L N + A+ G +A V + T
Sbjct: 68 LKNSTLSNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLT 127
Query: 436 GLGPEKTSFFQALSIPTKISKGTIESSTMY 525
+ P+ FQ+L+IPTKI KG IE T +
Sbjct: 128 NISPDGIGIFQSLNIPTKILKGQIEIITNF 157
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/82 (29%), Positives = 43/82 (52%)
Frame = +3
Query: 480 PYQDFKGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 659
P + KG II + +L+ G K+ +EATLL LNI PF + + Y++G + P +
Sbjct: 143 PTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKIISFYENGKSYDPSV 202
Query: 660 LDIKPEDLRAKFQAGVANVAAL 725
L+ F+ ++++ +L
Sbjct: 203 LNFNESMFDKSFKDCLSSIESL 224
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 60.9 bits (141), Expect = 3e-08
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +1
Query: 265 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 444
NP L+P + GNVG +FT+GDL E +++ + KV APA G +A + V++P NTGL
Sbjct: 56 NPVFLNLVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAPAHTGLVAHIDVIVPPGNTGLN 115
Query: 445 PEKTSFFQALSIPTKISKGTIESSTMYTS*SPVTRLELLKPP-FSTC*TSLHSHMVLLL 618
T PT S+ +I+ + Y P+ + L P + C T V LL
Sbjct: 116 LAHTRASIKPISPT-FSRVSIKMTLHY---QPIKEVALGNTPIIAFCDTDSPMQCVALL 170
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 60.1 bits (139), Expect = 6e-08
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +1
Query: 265 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 441
NP L+P + GNVG + T+GDL EV ++ + KV APAR G ++ + V++P NTGL
Sbjct: 612 NPVFLNLVPLLVGNVGLISTKGDLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 59.7 bits (138), Expect = 8e-08
Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +1
Query: 268 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 447
P LEKL+ +I G + T + ++ L +N+ APA+PGA+ P VV+PA T L P
Sbjct: 74 PELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAP 133
Query: 448 EK-TSFFQALSIPTKISKG--TIESST 519
QAL IP +I KG TI+ T
Sbjct: 134 GPIVGQMQALGIPARIEKGKVTIQKDT 160
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/85 (32%), Positives = 42/85 (49%)
Frame = +3
Query: 495 KGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 674
KG I D +LK G+ + A +LN L I P GL V VY+ G ++ P++L I
Sbjct: 151 KGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYEDGIVYTPDVLAIDE 210
Query: 675 EDLRAKFQAGVANVAALSLAIGYPT 749
++ Q + L++ I YPT
Sbjct: 211 QEYIDMLQKAYMHAFNLAVNIAYPT 235
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Frame = +1
Query: 268 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL-- 441
P ++K++ + G F+FT + L +NK AR G IA + V +PA NTG+
Sbjct: 59 PGMDKMMDQLTGQCMFMFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTGIAP 118
Query: 442 GPEKTSFFQALSIPTKISKGTI 507
GP T F +A IPTKI +GTI
Sbjct: 119 GPMLTEFKEA-GIPTKIDQGTI 139
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 53.6 bits (123), Expect = 5e-06
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 295 IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQA 471
++G VGF FT + EV + EN V+ A+PG AP +V+PA T P S F
Sbjct: 90 VRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGK 149
Query: 472 LSIPTKISKGTI 507
L IPT++ +G I
Sbjct: 150 LKIPTRVQEGKI 161
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 53.2 bits (122), Expect = 7e-06
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 453
+E L +++G VFT+ + ++ L ++K +APA+ G+IAP +V+PA +T P
Sbjct: 71 VEGLADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGP 130
Query: 454 -TSFFQALSIPTKISKGTI 507
Q + IP KI KG+I
Sbjct: 131 ILGELQQVGIPAKIDKGSI 149
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 53.2 bits (122), Expect = 7e-06
Identities = 26/84 (30%), Positives = 46/84 (54%)
Frame = +3
Query: 510 IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRA 689
+++D + + G+ V + +L+ L I P GL ++ V+ G +F PE L+I ++ RA
Sbjct: 158 VLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVFSEGVLFTPEELEIDVDEYRA 217
Query: 690 KFQAGVANVAALSLAIGYPTIASA 761
Q+ A+ LS+ YPT +A
Sbjct: 218 DIQSAAASARNLSVNAAYPTERTA 241
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 453
L+ L +++G VG V T + + +L +K AP G +AP +V+P +TG+ P
Sbjct: 78 LDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGP 137
Query: 454 -TSFFQALSIPTKISKGTIE 510
Q + +I +G+I+
Sbjct: 138 FVGELQTIGANARIQEGSIQ 157
Score = 43.6 bits (98), Expect = 0.006
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +2
Query: 62 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRK 241
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 242 AIKD 253
A+++
Sbjct: 70 ALEE 73
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 52.8 bits (121), Expect = 9e-06
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 444
N +EK ++ G GF+FT + ++ +++N V+ A+PG + +++PA NTG+
Sbjct: 86 NAEIEK---YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGIN 142
Query: 445 PEKT-SFFQALSIPTKISKGTI 507
P S F L IPT+I G I
Sbjct: 143 PGPVLSRFSKLKIPTQIRDGKI 164
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +1
Query: 292 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQA 471
++ N+G +FT +L + + + + + G IA +++I L P +T FFQA
Sbjct: 76 YLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQA 135
Query: 472 LSIPTKISKGTIE 510
L IPT+ISK +IE
Sbjct: 136 LGIPTRISKSSIE 148
Score = 39.5 bits (88), Expect = 0.092
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 98 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMM 235
K I LL+ Y IV +N+ S+Q+ IR LRG+S +++GK + +
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFL 56
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-E 450
+E + H++G +FT + E+ L + K+ AR G IA +V+PA NTG+ P
Sbjct: 80 VEGIEEHLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNTGIPPGP 139
Query: 451 KTSFFQALSIPTKISKGTI 507
S F L IPT++ +G+I
Sbjct: 140 MISNFNKLGIPTRVQEGSI 158
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/77 (33%), Positives = 38/77 (49%)
Frame = +3
Query: 528 ILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGV 707
+ K G+ V AT+L+ L I P GL ++ YD GTI+ PE+L + +
Sbjct: 163 VCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAA 222
Query: 708 ANVAALSLAIGYPTIAS 758
N LS+ YPT A+
Sbjct: 223 QNAFNLSVNTAYPTGAT 239
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +1
Query: 301 GNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALS 477
G+ F+FT + ++ K+ + + APA+PG +A +V+PA +TGL P S F L
Sbjct: 93 GSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLK 152
Query: 478 IPTKISKGTI 507
I T + GTI
Sbjct: 153 IKTMVKGGTI 162
Score = 38.7 bits (86), Expect = 0.16
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +3
Query: 510 IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVY-DSGTIFAP-EILDIKPEDL 683
I D + KPGD + A+LL L I+P + +K Y S + P E L +
Sbjct: 164 IAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAYIKSLNRWVPAEELVLDLNKY 223
Query: 684 RAKFQAGVANVAALSLAIGYP 746
+ + Q N AL ++I YP
Sbjct: 224 KEQIQEAYTNALALGVSIAYP 244
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 265 NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLG 444
NP KL+ ++ V T + ++ L E+K AP + GAIAP + + + +TG+
Sbjct: 78 NPEFAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMP 137
Query: 445 PEK-TSFFQALSIPTKISKGTI 507
P S +A+ IP I KG I
Sbjct: 138 PGPFLSELKAVGIPAAIDKGKI 159
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 46.0 bits (104), Expect = 0.001
Identities = 28/80 (35%), Positives = 37/80 (46%)
Frame = +3
Query: 528 ILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGV 707
++K G+ V A L L+I P GL VK + DSG I PE L I E + FQ
Sbjct: 160 VVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVILTPETLAIDTEKVLEDFQRAY 219
Query: 708 ANVAALSLAIGYPTIASARI 767
L++ Y T +A I
Sbjct: 220 QMALNLAVNSAYVTEETAEI 239
Score = 34.7 bits (76), Expect = 2.6
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 98 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 247
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A+
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL 67
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/80 (27%), Positives = 44/80 (55%)
Frame = +2
Query: 8 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRI 187
L+ + RS L+++ ++ + K +I + D Y +++ + N+ S QQ+R
Sbjct: 10 LMPRSKRSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRT 68
Query: 188 SLRGSSIVLMGKNTMMRKAI 247
S++G + + MGKN +MR A+
Sbjct: 69 SMKGYARIFMGKNQLMRYAL 88
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 42.7 bits (96), Expect = 0.010
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +1
Query: 322 TRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP--AHNTGLGPEKTSFFQALSIPTKIS 495
T ++ ++ +E+KV P + G IAP +VIP N +GP +T +AL + TK++
Sbjct: 86 TNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTE-LRALGVKTKVT 144
Query: 496 KGTIE 510
G IE
Sbjct: 145 SGKIE 149
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 41.9 bits (94), Expect = 0.017
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -2
Query: 464 KKEVFSGPR--PVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMC 291
++ +F R PVL G T A P RAGA TL+ + S TS +SP V PTLP
Sbjct: 6 RESLFKSTRLSPVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRR 65
Query: 290 GNSFSRAG 267
G + G
Sbjct: 66 GTRLRKTG 73
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 40.3 bits (90), Expect = 0.053
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 316 VFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKI 492
+FT + E+ L + K + +PG IA +VIP NTGL P S F L IPT+I
Sbjct: 92 LFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRI 151
Query: 493 SKGTI 507
+I
Sbjct: 152 QGNSI 156
Score = 33.9 bits (74), Expect = 4.6
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = +3
Query: 510 IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRA 689
I D + KPGD + A+LL L+I+ + +K YD G I + L + E+ +
Sbjct: 158 ITRDTVVAKPGDTISEELASLLQRLDIALKEVKINIKAAYDHGIIILRDQLVLDLEEYKN 217
Query: 690 KFQAGVANVAALSLAIGYP 746
+ + I +P
Sbjct: 218 MVMNAHLDALKIGSEIAWP 236
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 40.3 bits (90), Expect = 0.053
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +1
Query: 274 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLEN-KVQAPARPGAIAPLSVVIPAHNTGL--G 444
+EKL ++ G F+FT+ D + + EN K++ A PG A VVIPA +TG+ G
Sbjct: 79 IEKLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAG 137
Query: 445 PEKTSFFQALSIPTKISKGTI 507
P S F L + TK+ G +
Sbjct: 138 P-ILSVFGKLKVQTKVQDGKV 157
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 39.1 bits (87), Expect = 0.12
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-E 450
+ ++ I + +FT D + L + K+ AP + GA+AP+ +VI T L P
Sbjct: 72 MNDMVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGP 131
Query: 451 KTSFFQALSIPTKISKGTI 507
Q L IP+ I G +
Sbjct: 132 VVGELQNLGIPSGIDGGKV 150
Score = 38.3 bits (85), Expect = 0.21
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 77 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKA 244
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARS 66
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 38.7 bits (86), Expect = 0.16
Identities = 18/59 (30%), Positives = 36/59 (61%)
Frame = +2
Query: 77 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKD 253
WK + +I + ++E+ +V + + Q+QQIR +LRG++ V M +NT++ A+ +
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALNE 69
Score = 36.3 bits (80), Expect = 0.86
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 292 HIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-TSFFQ 468
H +G +FT + ++ L + K + A+PG AP +VIP T P Q
Sbjct: 80 HAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQ 139
Query: 469 ALSIPTKISKGTIE 510
+ IP I G ++
Sbjct: 140 QVGIPAAIEGGKVK 153
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +3
Query: 528 ILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 677
++K G+ + A L L + P GL+++ Y TIF P++L I E
Sbjct: 160 VVKKGEVINKKVAEALVKLGVKPMDVGLILQAAYYRETIFTPDLLAIDEE 209
>UniRef50_A4AHE7 Cluster: Putative uncharacterized protein; n=1;
marine actinobacterium PHSC20C1|Rep: Putative
uncharacterized protein - marine actinobacterium
PHSC20C1
Length = 619
Score = 37.9 bits (84), Expect = 0.28
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 569 GGFRSSNLVTGLQDVYIVDDSIVPFEILVGIERAWKKEV---FSGPRPVLWAGMTTDNGA 399
G R N TG DV V + ++P+ +L G+E+ W E+ ++ P +AG NGA
Sbjct: 513 GALRERNDSTGDNDVLKVYEKLLPYAVLFGLEKEWSNELSRYYTENSPDWYAGSGVFNGA 572
Query: 398 M 396
+
Sbjct: 573 V 573
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 37.5 bits (83), Expect = 0.37
Identities = 25/78 (32%), Positives = 39/78 (50%)
Frame = +1
Query: 193 TWLQYRAHGKKHNDAQSHQRPLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKV 372
T L RA G DAQ+ L+KL ++ G+VG +FT D E++D +
Sbjct: 70 TKLTARALGTTPEDAQAD--------GLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNLTQ 121
Query: 373 QAPARPGAIAPLSVVIPA 426
AR G++A ++ IP+
Sbjct: 122 VDFARAGSVATRTITIPS 139
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 36.7 bits (81), Expect = 0.65
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNT 435
L ++ ++ L+ +I+ +F+ + ++ L K P + GA+AP+ +V+ + T
Sbjct: 71 LKSDESIRPLVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGET 130
Query: 436 GLGP-EKTSFFQALSIPTKISKGTI 507
P Q+ IP I G +
Sbjct: 131 SFSPGPMVGKLQSAGIPAAIKGGKV 155
>UniRef50_Q9Y9W8 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Aeropyrum pernix|Rep: Acidic ribosomal protein P0
homolog - Aeropyrum pernix
Length = 341
Score = 36.7 bits (81), Expect = 0.65
Identities = 26/93 (27%), Positives = 35/93 (37%)
Frame = +3
Query: 483 YQDFKGYY*IINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEIL 662
YQ G I + + KPGD + A LL L I P G+ VK D G + ++L
Sbjct: 153 YQVRGGKIYIAKETVVAKPGDVISEDLAGLLMALGIRPIEKGVRVKFAIDGGVLITEDLL 212
Query: 663 DIKPEDLRAKFQAGVANVAALSLAIGYPTIASA 761
E R L+ I Y + A
Sbjct: 213 RPDIEAFRGDVIDAAKEALGLATEIVYMPVPEA 245
>UniRef50_Q9LLN7 Cluster: Leucine rich repeat containing protein
kinase; n=8; Oryza sativa|Rep: Leucine rich repeat
containing protein kinase - Oryza sativa (Rice)
Length = 1074
Score = 35.5 bits (78), Expect = 1.5
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Frame = +1
Query: 250 RPLDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV-- 414
R L N AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 394 RTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARL 453
Query: 415 --VIPAHN--TGLGPEKTSFFQALSI 480
I HN G PEK S +L +
Sbjct: 454 ISFIADHNKLAGSLPEKMSNLSSLEL 479
>UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 245
Score = 35.1 bits (77), Expect = 2.0
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +2
Query: 17 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 196
K RS TLS+ K +I + +D+Y C++ ++ + ++++R R
Sbjct: 3 KSKRSKLTTLSKTPVRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQWR 62
Query: 197 GSSIVLMGKNTMMRKAI-KDPWTTIQ 271
G+ GK +M KA+ + P T Q
Sbjct: 63 GTGRFFFGKGKVMAKALGETPETEYQ 88
>UniRef50_Q4FX48 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 1522
Score = 34.7 bits (76), Expect = 2.6
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +2
Query: 125 PKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDPWTTIQPSRNCCHTSRA 304
P A S + Q + RG S+ +MGK +MR+A T+ PS TSR
Sbjct: 315 PSTDSTAAPGTSSSSVAQASLKSRGRSLSVMGKKKVMRRASTGTATSRPPS---AATSRR 371
Query: 305 TLASCSPA 328
SCS A
Sbjct: 372 PSVSCSAA 379
>UniRef50_Q4RSU0 Cluster: Chromosome 12 SCAF14999, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 12
SCAF14999, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 789
Score = 34.3 bits (75), Expect = 3.5
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +2
Query: 245 IKDPWT-TIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVPLPHCQSSF 421
+ D WT ++Q + C T CSPA +S T SK +P H
Sbjct: 183 LNDMWTISLQDREHACWEEARTRCLCSPARAEPKSPTTSSSLNSKATXTRIPTEHLLRGS 242
Query: 422 PP 427
PP
Sbjct: 243 PP 244
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 34.3 bits (75), Expect = 3.5
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 268 PALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 447
P L L ++KG +FT+ E+R++L + RPGA A +V I + P
Sbjct: 81 PKLHHLCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIASGPLPKFP 140
Query: 448 EKTS-FFQALSIPTKISKGTIESSTMY 525
+ L +P K+ +G + Y
Sbjct: 141 HTMEPVLRQLGMPVKLVRGVVHLERDY 167
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 34.3 bits (75), Expect = 3.5
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 277 EKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EK 453
++L ++ G + V+T + ++ L K + A+ G IAP +VIP T P
Sbjct: 82 KELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPTSFKPGPL 141
Query: 454 TSFFQALSIPTKISKGTI 507
FQ + IP I G +
Sbjct: 142 VGEFQQVGIPAGIEGGKV 159
>UniRef50_Q01NQ2 Cluster: Pyrrolo-quinoline quinone precursor; n=1;
Solibacter usitatus Ellin6076|Rep: Pyrrolo-quinoline
quinone precursor - Solibacter usitatus (strain
Ellin6076)
Length = 549
Score = 33.9 bits (74), Expect = 4.6
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Frame = -2
Query: 773 QWNAG*SNSWVTNSQRKSSYISNSSLELGTEIFWFDVQNFRCKNSSRIIYLLNNKTI*EW 594
+W+ ++ ++S IS S++ G +FW + N +R + L T+ +
Sbjct: 33 EWSTAGGDAHRSSSVATDPKISKESVQKGFALFW----KMKLNNEARQLNGLTAPTLMD- 87
Query: 593 RDVQHVEKGGFRSSNLVTGLQD-VYIVDDSIVPFEILVGIERAWKKEVFSGPRPVLWAGM 417
+H+ GFRS VTG D VY VD + + W+K G +P A M
Sbjct: 88 ---RHIGIHGFRSFGFVTGSGDNVYAVDTDLARID--------WQKNF--GGKPPADASM 134
Query: 416 TTDNGAMAPGRA 381
T G M G A
Sbjct: 135 TCP-GGMTSGTA 145
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 33.9 bits (74), Expect = 4.6
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 LEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPE 450
L K +KG G +FT EV + E + AR G +A +VV+P +
Sbjct: 90 LHKASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFS 149
Query: 451 KTSFFQALSIPTKISKGTI 507
+ L +PTK+ KG I
Sbjct: 150 MEPQLRKLGLPTKLDKGVI 168
>UniRef50_A7I648 Cluster: Putative uncharacterized protein; n=1;
Candidatus Methanoregula boonei 6A8|Rep: Putative
uncharacterized protein - Methanoregula boonei (strain
6A8)
Length = 647
Score = 33.9 bits (74), Expect = 4.6
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 487 KISKGTIESSTMYTS*SPVTRLELLKPPFSTC*TSLHSHMVLLLSRYMILELFLHL-KFW 663
++S G+ SS ++ S +T P FS LH+H++ + ++ +++ L L+L KFW
Sbjct: 198 QLSIGSSISSALWNSTRTITNTINEYPLFSFTWGDLHAHVISIFNQVLLIFLLLYLYKFW 257
Query: 664 TS 669
S
Sbjct: 258 DS 259
>UniRef50_A0CZG7 Cluster: Chromosome undetermined scaffold_32, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_32,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1153
Score = 33.5 bits (73), Expect = 6.1
Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +3
Query: 558 SEATLLNMLNISPF---SYGLVVKQVYDSGTIFAPEILDIKPEDLRA 689
+++ +LN +N F SYGL + + YD ++A ++L+I+P ++A
Sbjct: 265 NQSLVLNPINSKAFYLKSYGLRLTENYDEALVWADKVLEIEPNHIKA 311
>UniRef50_UPI00006D0E10 Cluster: hypothetical protein
TTHERM_00070730; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00070730 - Tetrahymena
thermophila SB210
Length = 5422
Score = 33.1 bits (72), Expect = 8.0
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 256 LDNNPALEKLLPHIKGNVGFVFTRGDLVEVR 348
L NN L+KLLP I+G ++ RGDL E++
Sbjct: 832 LANNEVLQKLLPIIEGKSLVLYERGDLKEIK 862
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 33.1 bits (72), Expect = 8.0
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +2
Query: 26 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 205
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 206 IVLMGKNTMMR 238
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>UniRef50_A2FSF9 Cluster: 14-3-3 protein; n=1; Trichomonas vaginalis
G3|Rep: 14-3-3 protein - Trichomonas vaginalis G3
Length = 353
Score = 33.1 bits (72), Expect = 8.0
Identities = 31/129 (24%), Positives = 49/129 (37%)
Frame = +2
Query: 38 ATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLM 217
A R E T YF I Q D Y ++ D + +Q + + L + +
Sbjct: 127 ADFLRYQAEYAKTQLQPYF--ITQAADSYQNALLIAKDQFEPESIQYLGLVLNYTVFLYE 184
Query: 218 GKNTMMRKAIKDPWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVP 397
KN M +AIK TT+ + +++ A P LR + WR ++ L P
Sbjct: 185 FKN-MKVEAIKFIETTLDMVMPTIYANQSKYADSQPYVQMLRDNSTLWRRETDLPEEKPP 243
Query: 398 LPHCQSSFP 424
P + P
Sbjct: 244 EPEKKEENP 252
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 863,090,196
Number of Sequences: 1657284
Number of extensions: 18645330
Number of successful extensions: 55331
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 52687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55306
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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