Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0507
         (736 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X83957-1|CAA58788.1| 6669|Homo sapiens nebulin protein.                30   9.9  
U35636-1|AAB02621.1| 2472|Homo sapiens nebulin protein.                30   9.9  
AC107052-1|AAY14977.1| 3867|Homo sapiens unknown protein.              30   9.9  

>X83957-1|CAA58788.1| 6669|Homo sapiens nebulin protein.
          Length = 6669

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -3

Query: 470  VLARKCLSTPSLGHYQSWLHR*T*CTERSD-IHYRKIYIL 354
            VLA+KC +  S   Y+++LH+ T   ++SD IH R+ Y L
Sbjct: 2853 VLAKKCQTLVSDVDYKNYLHQWTCLPDQSDVIHARQAYDL 2892


>U35636-1|AAB02621.1| 2472|Homo sapiens nebulin protein.
          Length = 2472

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -3

Query: 470  VLARKCLSTPSLGHYQSWLHR*T*CTERSD-IHYRKIYIL 354
            VLA+KC +  S   Y+++LH+ T   ++SD IH R+ Y L
Sbjct: 2331 VLAKKCQTLVSDVDYKNYLHQWTCLPDQSDVIHARQAYDL 2370


>AC107052-1|AAY14977.1| 3867|Homo sapiens unknown protein.
          Length = 3867

 Score = 29.9 bits (64), Expect = 9.9
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -3

Query: 470  VLARKCLSTPSLGHYQSWLHR*T*CTERSD-IHYRKIYIL 354
            VLA+KC +  S   Y+++LH+ T   ++SD IH R+ Y L
Sbjct: 2610 VLAKKCQTLVSDVDYKNYLHQWTCLPDQSDVIHARQAYDL 2649



 Score = 29.9 bits (64), Expect = 9.9
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = -3

Query: 470  VLARKCLSTPSLGHYQSWLHR*T*CTERSD-IHYRKIYIL 354
            VLA+KC +  S   Y+++LH+ T   ++SD IH R+ Y L
Sbjct: 2853 VLAKKCQTLVSDVDYKNYLHQWTCLPDQSDVIHARQAYDL 2892


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,229,845
Number of Sequences: 237096
Number of extensions: 1485559
Number of successful extensions: 5481
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5481
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)