Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0505
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   4.9  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.5  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 329 PHAGYLPQPPIYGALGFG 382
           P  GY P  P   A G+G
Sbjct: 62  PTTGYYPYDPALAAYGYG 79


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 9   SLNPCENELI*VRKKKNEQ 65
           S NPCEN+   V+ K   Q
Sbjct: 104 STNPCENQATCVQNKNQYQ 122


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 611 NVISVRGNVIQTPSMSMCETAINN 540
           ++ S RGN   TPS +   T  NN
Sbjct: 120 DISSTRGNNNNTPSATNNNTNFNN 143


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 611 NVISVRGNVIQTPSMSMCETAINN 540
           ++ S RGN   TPS +   T  NN
Sbjct: 68  DISSTRGNNNNTPSATNNNTNFNN 91


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 611 NVISVRGNVIQTPSMSMCETAINN 540
           ++ S RGN   TPS +   T  NN
Sbjct: 251 DISSTRGNNNNTPSATNNNTNFNN 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,023
Number of Sequences: 336
Number of extensions: 4316
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)