Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0505
(789 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22077| Best HMM Match : MIP (HMM E-Value=0) 47 2e-05
SB_32809| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_22076| Best HMM Match : MIP (HMM E-Value=3.89981e-42) 34 0.15
SB_33719| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_39426| Best HMM Match : C4 (HMM E-Value=0) 32 0.46
SB_57625| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_27263| Best HMM Match : Kelch_1 (HMM E-Value=2.10055e-42) 28 7.5
SB_25189| Best HMM Match : Drf_FH1 (HMM E-Value=4.1) 28 7.5
SB_23767| Best HMM Match : DicB (HMM E-Value=7.9) 28 9.9
SB_22927| Best HMM Match : SerH (HMM E-Value=1.1) 28 9.9
SB_15075| Best HMM Match : Extensin_2 (HMM E-Value=0.39) 28 9.9
>SB_22077| Best HMM Match : MIP (HMM E-Value=0)
Length = 374
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/91 (28%), Positives = 45/91 (49%)
Frame = +2
Query: 236 SDVRVVHEWRQIVSEFISTLLLLVLGCMACIPHAGYLPQPPIYGALGFGLVVSFNVQIFG 415
SD++ W + +EF++T + + C +C+ P + AL GL ++ G
Sbjct: 39 SDLKKEEFWVSVFAEFLATFFFVFMVCGSCLLWDKNDPPAVQHIALCAGLGIATWAMAVG 98
Query: 416 HISGAHMNPSVTLASLIWGAISFPLAIAFIV 508
H SG H+NP+VT+ L I+ + +IV
Sbjct: 99 HWSGGHINPAVTVGFLSSNKIAILQGVCYIV 129
Score = 31.9 bits (69), Expect = 0.61
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 416 HISGAHMNPSVTLASLIWGAISFPLAIAFIV 508
HISG H+NP+VT++ +I +SF L AF V
Sbjct: 192 HISGGHINPAVTISFMIVRKVSF-LRGAFYV 221
>SB_32809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 36.7 bits (81), Expect = 0.021
Identities = 16/65 (24%), Positives = 35/65 (53%)
Frame = +2
Query: 272 VSEFISTLLLLVLGCMACIPHAGYLPQPPIYGALGFGLVVSFNVQIFGHISGAHMNPSVT 451
++E +++ + + L C +C+ + + AL GL S V + H++G +NP+V
Sbjct: 70 LAELLASHVFVFLVCASCVSWPHFQAPSVQHIALTAGLTTSTLVMVMSHVTGGQINPAVA 129
Query: 452 LASLI 466
+A ++
Sbjct: 130 VAMVV 134
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 490 GYCVYSTQCAGAILGYGLLIAVSHIDMDG-VCMTLPRTEITLFQALIVEAVLTAALSF 660
G+ Q G +LG LL ++ + G + MT+P I + QA+ +E +LT L F
Sbjct: 143 GFGFVFRQGLGGLLGAALLFGLTPSSIRGSLGMTVPAPTIQVGQAVAMETILTFLLVF 200
>SB_22076| Best HMM Match : MIP (HMM E-Value=3.89981e-42)
Length = 365
Score = 33.9 bits (74), Expect = 0.15
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +2
Query: 260 WRQIVSEFISTLLLLVLGCMACIPHAGYLPQPPIYGALGFGLVVSFNVQIFGHISGAHMN 439
W +I++EFI T L + + C + + P + AL GL +S N
Sbjct: 17 WTEILAEFIITSLFVSIVCGTALQNWS-TPPTLTHMALNSGLAAGTFAMCMWDVSSGLFN 75
Query: 440 PSVTLASLIWGAISFPLAIAFIV 508
P++T+ LI G + I +I+
Sbjct: 76 PALTIGFLITGKKTLLQTIFYIM 98
>SB_33719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +2
Query: 260 WRQIVSEFISTLLLLVLGCMACIPHAGYLPQPPIYGALGFGLVVSFNVQIFGHISG--AH 433
W + +E++ TLL + A + G I A GF + Q+F +S H
Sbjct: 16 WICVFAEYLGTLLFMFSVSAASLRWEGTPSTLEIALAAGFSMATV--TQVFRWVSRPLVH 73
Query: 434 MNPSVTLASLIWGAISFPLAIAFIV 508
NP+VT+AS + G S + +++
Sbjct: 74 ANPAVTVASFLAGDTSLVASFLYVI 98
>SB_39426| Best HMM Match : C4 (HMM E-Value=0)
Length = 188
Score = 32.3 bits (70), Expect = 0.46
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 400 CPNIWTYIWSAHESVRHTGL--ADMGRDIVSAGYCVYS 507
CP W+ +WS + + HTG + G+ + S+G C+ S
Sbjct: 49 CPGGWSSLWSGYSFLMHTGAGGSGTGQSLGSSGSCLES 86
>SB_57625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1751
Score = 29.1 bits (62), Expect = 4.3
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 2/98 (2%)
Frame = -1
Query: 495 IASGNDIAPHISEASVTDGFMCAPDICPNIWTLNETTKPNPSAPYIGG*GKYPACGIHAM 316
+A+ DI E ++ +C +C N+ N+T + N G HA+
Sbjct: 1299 VAASTDIDGECQE-KMSFVVLCCVVLCNNVSCRNDTVRNNTIMETSRSRCTRTQRGSHAL 1357
Query: 315 HPSTRSSNVEINSDTICLHSCTTRTSLC--ILMLARRL 208
+PS S+ I S +RTS C +LA RL
Sbjct: 1358 YPSASSAITSIASRPRAGSKRNSRTSACYRCRLLATRL 1395
>SB_27263| Best HMM Match : Kelch_1 (HMM E-Value=2.10055e-42)
Length = 559
Score = 28.3 bits (60), Expect = 7.5
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 423 DICPNIWTLNETTKPNPSAPYI 358
D C N+WT N+ K +AP++
Sbjct: 522 DACTNVWTANQQQKEPCAAPFV 543
>SB_25189| Best HMM Match : Drf_FH1 (HMM E-Value=4.1)
Length = 570
Score = 28.3 bits (60), Expect = 7.5
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +1
Query: 400 CPNIWTYIWSAHESVRHTGLADMGRDIVSAGYCVYSTQCAGAILGYGLLIAVSHIDMDGV 579
C +W Y +A + +T A + ++A +Y T CA + Y IA + I
Sbjct: 478 CATMWHYNIAAFAIIYYTSCATVWHYNIAATAIIYYTSCA-TVWHYN--IAATAIIYYTS 534
Query: 580 CMTLPRTEITLFQALIVEAVLTAALSFL 663
C T+ I A+I +AVL + L
Sbjct: 535 CATVWHYNIAA-TAIITQAVLLCGTTIL 561
>SB_23767| Best HMM Match : DicB (HMM E-Value=7.9)
Length = 344
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = +1
Query: 520 GAILGYGLLIAVSHIDMDGVCMTLPRTEITLFQALIV----EAVLTAALSFL---NCACW 678
G +L YG +S + G + + +T +A E +LT SF NC C+
Sbjct: 174 GQVLRYGQPFMLSTLPGVGGSLRMHSDRVTFNKAAKKSRKQECLLTDNSSFTAHWNCLCF 233
Query: 679 DPVNKNKQDSVPV 717
DP + + D +PV
Sbjct: 234 DPQQRLENDGMPV 246
>SB_22927| Best HMM Match : SerH (HMM E-Value=1.1)
Length = 678
Score = 27.9 bits (59), Expect = 9.9
Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +1
Query: 262 ETNRIGVYFHVAASRAWVHGMYTARWIFTSTTNIRSTRVRFG---SLV*CPNIWTYIWSA 432
++ RI + HV + G+ F TT +STRV S V T + A
Sbjct: 298 KSTRIDLVSHVTGPSSVASGLTMTTKAFNFTTVTKSTRVSHASSTSFVGTSLTMTQNFEA 357
Query: 433 HESVRHTGLADMGRDIVSAGYCVYSTQ 513
SV+ + AD+G +I+S+ V +++
Sbjct: 358 -TSVKQSARADLGSNIMSSSTMVMASK 383
>SB_15075| Best HMM Match : Extensin_2 (HMM E-Value=0.39)
Length = 541
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 333 CGIHAMHPSTRSSNVEINSDTICLHSCTTRTSLCILMLARRLTV 202
CG A HP+T ++E + T+C + T +C M TV
Sbjct: 40 CGYMATHPATVCDHMETHPVTVCNYMETHPAIVCDYMETHPATV 83
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,111,335
Number of Sequences: 59808
Number of extensions: 543175
Number of successful extensions: 1463
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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