Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0501
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   6.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   6.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 57  SNYM*YVFSFYYKCLYMFYYLMF 125
           S Y  Y+F   +KCL  F  ++F
Sbjct: 294 SRYFIYMFVSVWKCLLFFVSVLF 316


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 57  SNYM*YVFSFYYKCLYMFYYLMF 125
           S Y  Y+F   +KCL  F  ++F
Sbjct: 294 SRYFIYMFVSVWKCLLFFVSVLF 316


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 57  SNYM*YVFSFYYKCLYMFYYLMF 125
           S Y  Y+F   +KCL  F  ++F
Sbjct: 294 SRYFIYMFVSVWKCLLFFVSVLF 316


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 57  SNYM*YVFSFYYKCLYMFYYLMF 125
           S Y  Y+F   +KCL  F  ++F
Sbjct: 294 SRYFIYMFVSVWKCLLFFVSVLF 316


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +1

Query: 271 IL*YNITRNQTWFIFISASSRIIVL 345
           IL  N+T N   FIF SA   I +L
Sbjct: 78  ILMKNVTLNDVVFIFCSAPIIITIL 102


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 540 NYMKRNVMTNVVYFIITIFPNI 475
           NY K  ++  V YF+I I   I
Sbjct: 33  NYSKIGIVQTVAYFVIFIILTI 54


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 506 FILLLQYFQTFLLRQPSLFCF 444
           F+L L YF   LL  P ++ F
Sbjct: 195 FLLCLDYFTLHLLFLPCIYYF 215


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,522
Number of Sequences: 336
Number of extensions: 2728
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)