Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0500
(533 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 173 4e-43
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 173 4e-43
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 173 4e-43
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 173 4e-43
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 168 9e-42
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 113 4e-25
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 1e-18
AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein pr... 34 0.27
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 2.6
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 2.6
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 2.6
AK127866-1|BAC87168.1| 204|Homo sapiens protein ( Homo sapiens ... 30 5.9
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 173 bits (420), Expect = 4e-43
Identities = 87/104 (83%), Positives = 89/104 (85%), Gaps = 5/104 (4%)
Frame = +1
Query: 1 VKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEII 180
VKEKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEII
Sbjct: 41 VKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEII 100
Query: 181 HLLTGENPLQVLVTAIINSGPREDS-----LGSVVRVQFVVKPL 297
HLLTGENPLQVLV AIINSGPREDS G+V R V PL
Sbjct: 101 HLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Score = 160 bits (389), Expect = 2e-39
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +3
Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSS
Sbjct: 126 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 185
Query: 435 NSYAIKKKDELERVAKSNR 491
NSYAIKKKDELERVAKSNR
Sbjct: 186 NSYAIKKKDELERVAKSNR 204
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 173 bits (420), Expect = 4e-43
Identities = 87/104 (83%), Positives = 89/104 (85%), Gaps = 5/104 (4%)
Frame = +1
Query: 1 VKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEII 180
VKEKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEII
Sbjct: 41 VKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEII 100
Query: 181 HLLTGENPLQVLVTAIINSGPREDS-----LGSVVRVQFVVKPL 297
HLLTGENPLQVLV AIINSGPREDS G+V R V PL
Sbjct: 101 HLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Score = 160 bits (389), Expect = 2e-39
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +3
Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSS
Sbjct: 126 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 185
Query: 435 NSYAIKKKDELERVAKSNR 491
NSYAIKKKDELERVAKSNR
Sbjct: 186 NSYAIKKKDELERVAKSNR 204
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 173 bits (420), Expect = 4e-43
Identities = 87/104 (83%), Positives = 89/104 (85%), Gaps = 5/104 (4%)
Frame = +1
Query: 1 VKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEII 180
VKEKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEII
Sbjct: 41 VKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEII 100
Query: 181 HLLTGENPLQVLVTAIINSGPREDS-----LGSVVRVQFVVKPL 297
HLLTGENPLQVLV AIINSGPREDS G+V R V PL
Sbjct: 101 HLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Score = 157 bits (380), Expect = 3e-38
Identities = 76/79 (96%), Positives = 78/79 (98%)
Frame = +3
Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSS
Sbjct: 126 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 185
Query: 435 NSYAIKKKDELERVAKSNR 491
N YAIKK+DELERVAKSNR
Sbjct: 186 NFYAIKKRDELERVAKSNR 204
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 173 bits (420), Expect = 4e-43
Identities = 87/104 (83%), Positives = 89/104 (85%), Gaps = 5/104 (4%)
Frame = +1
Query: 1 VKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEII 180
VKEKYAKYLPHSAGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEII
Sbjct: 41 VKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEII 100
Query: 181 HLLTGENPLQVLVTAIINSGPREDS-----LGSVVRVQFVVKPL 297
HLLTGENPLQVLV AIINSGPREDS G+V R V PL
Sbjct: 101 HLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Score = 160 bits (389), Expect = 2e-39
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +3
Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSS
Sbjct: 126 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 185
Query: 435 NSYAIKKKDELERVAKSNR 491
NSYAIKKKDELERVAKSNR
Sbjct: 186 NSYAIKKKDELERVAKSNR 204
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 168 bits (409), Expect = 9e-42
Identities = 85/104 (81%), Positives = 87/104 (83%), Gaps = 5/104 (4%)
Frame = +1
Query: 1 VKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEII 180
VKEKYAKYLPHSAGRYA FRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEII
Sbjct: 41 VKEKYAKYLPHSAGRYAANAFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEII 100
Query: 181 HLLTGENPLQVLVTAIINSGPREDS-----LGSVVRVQFVVKPL 297
HLLTGENPLQVLV AIINSGPREDS G+V R V PL
Sbjct: 101 HLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPL 144
Score = 160 bits (389), Expect = 2e-39
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +3
Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSS
Sbjct: 126 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 185
Query: 435 NSYAIKKKDELERVAKSNR 491
NSYAIKKKDELERVAKSNR
Sbjct: 186 NSYAIKKKDELERVAKSNR 204
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 113 bits (272), Expect = 4e-25
Identities = 54/55 (98%), Positives = 55/55 (100%)
Frame = +3
Query: 327 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 491
AIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKKKDELERVAKSNR
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 55
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 1e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +1
Query: 70 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 225
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>AB231860-1|BAE19678.1| 1640|Homo sapiens hypothetical protein
protein.
Length = 1640
Score = 34.3 bits (75), Expect = 0.27
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 133 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 41
C C + ++ E G R G G YG AC H C
Sbjct: 1423 CSCHNNSTCEPATGTCRCGPGFYGQACEHPC 1453
Score = 29.5 bits (63), Expect = 7.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 133 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 41
C+C++R L GA GLYG C TC
Sbjct: 686 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 716
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 2.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 133 CHCSDRASLESL*GAPRLGTGLYGNACVH 47
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
Score = 29.5 bits (63), Expect = 7.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 133 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 41
C+C++R L GA GLYG C TC
Sbjct: 506 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 536
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.1 bits (67), Expect = 2.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 133 CHCSDRASLESL*GAPRLGTGLYGNACVH 47
C C + ++ E G R G G YG AC H
Sbjct: 1113 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1141
Score = 29.5 bits (63), Expect = 7.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 133 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 41
C+C++R L GA GLYG C TC
Sbjct: 506 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 536
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.1 bits (67), Expect = 2.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 133 CHCSDRASLESL*GAPRLGTGLYGNACVH 47
C C + ++ E G R G G YG AC H
Sbjct: 1130 CSCHNNSTCEPATGTCRCGPGFYGQACEH 1158
Score = 29.5 bits (63), Expect = 7.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 133 CHCSDRASLESL*GAPRLGTGLYGNACVHTC 41
C+C++R L GA GLYG C TC
Sbjct: 523 CNCANRGRCHRLYGACLCDPGLYGRFCHLTC 553
>AK127866-1|BAC87168.1| 204|Homo sapiens protein ( Homo sapiens
cDNA FLJ45969 fis, clone PLACE7016454. ).
Length = 204
Score = 29.9 bits (64), Expect = 5.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 392 LCDCFNISECSLTCTCAQKPDCLVDSAQG*NINGL 288
LC C ++ C+ C C K C S Q ++NG+
Sbjct: 45 LCVCVHVCICACICACVWKFPCRNHSVQTESLNGV 79
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,033,405
Number of Sequences: 237096
Number of extensions: 1507949
Number of successful extensions: 3085
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3079
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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