Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0500
         (533 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.    162   3e-40
AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p pro...   162   3e-40
AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA...   162   3e-40
AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p pro...   159   2e-39
AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA...   159   2e-39
AY075413-1|AAL68236.1|  218|Drosophila melanogaster LD35371p pro...    36   0.026
AE014134-1862|AAF52933.1|  218|Drosophila melanogaster CG5108-PA...    36   0.026
AY069798-1|AAL39943.1|  172|Drosophila melanogaster SD03580p pro...    28   9.2  
AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynei...    28   9.2  
AF160933-1|AAD46873.1|  756|Drosophila melanogaster LD14168p pro...    28   9.2  
AE014297-4305|AAN14148.1|  664|Drosophila melanogaster CG1957-PB...    28   9.2  
AE014297-4304|AAF56844.1|  756|Drosophila melanogaster CG1957-PA...    28   9.2  
AE014296-116|AAN11446.1|  172|Drosophila melanogaster CG32345-PA...    28   9.2  

>U48394-1|AAB61633.1|  228|Drosophila melanogaster M(1)15D protein.
          Length = 228

 Score =  162 bits (393), Expect = 3e-40
 Identities = 82/104 (78%), Positives = 88/104 (84%), Gaps = 5/104 (4%)
 Frame = +1

Query: 1   VKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEII 180
           VKEK+A+YLPHSAGRYA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEII
Sbjct: 65  VKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEII 124

Query: 181 HLLTGENPLQVLVTAIINSGPREDS-----LGSVVRVQFVVKPL 297
           HLLTGENPLQ+LV+AIINSGPREDS      G+V R    V PL
Sbjct: 125 HLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPL 168



 Score =  160 bits (389), Expect = 1e-39
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +3

Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
           TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSS
Sbjct: 150 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 209

Query: 435 NSYAIKKKDELERVAKSNR 491
           NSYAIKKKDELERVAKSNR
Sbjct: 210 NSYAIKKKDELERVAKSNR 228


>AY075368-1|AAL68215.1|  228|Drosophila melanogaster GM13047p
           protein.
          Length = 228

 Score =  162 bits (393), Expect = 3e-40
 Identities = 82/104 (78%), Positives = 88/104 (84%), Gaps = 5/104 (4%)
 Frame = +1

Query: 1   VKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEII 180
           VKEK+A+YLPHSAGRYA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEII
Sbjct: 65  VKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEII 124

Query: 181 HLLTGENPLQVLVTAIINSGPREDS-----LGSVVRVQFVVKPL 297
           HLLTGENPLQ+LV+AIINSGPREDS      G+V R    V PL
Sbjct: 125 HLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPL 168



 Score =  160 bits (389), Expect = 1e-39
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +3

Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
           TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSS
Sbjct: 150 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 209

Query: 435 NSYAIKKKDELERVAKSNR 491
           NSYAIKKKDELERVAKSNR
Sbjct: 210 NSYAIKKKDELERVAKSNR 228


>AE014298-2526|AAF48700.1|  228|Drosophila melanogaster CG8922-PA
           protein.
          Length = 228

 Score =  162 bits (393), Expect = 3e-40
 Identities = 82/104 (78%), Positives = 88/104 (84%), Gaps = 5/104 (4%)
 Frame = +1

Query: 1   VKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEII 180
           VKEK+A+YLPHSAGRYA KRFRKAQCPIVERLT SLMM GRNNGKKLMA RIVKH+FEII
Sbjct: 65  VKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEII 124

Query: 181 HLLTGENPLQVLVTAIINSGPREDS-----LGSVVRVQFVVKPL 297
           HLLTGENPLQ+LV+AIINSGPREDS      G+V R    V PL
Sbjct: 125 HLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPL 168



 Score =  160 bits (389), Expect = 1e-39
 Identities = 78/79 (98%), Positives = 79/79 (100%)
 Frame = +3

Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
           TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSS
Sbjct: 150 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSS 209

Query: 435 NSYAIKKKDELERVAKSNR 491
           NSYAIKKKDELERVAKSNR
Sbjct: 210 NSYAIKKKDELERVAKSNR 228


>AY071138-1|AAL48760.1|  230|Drosophila melanogaster RE17836p
           protein.
          Length = 230

 Score =  159 bits (386), Expect = 2e-39
 Identities = 76/79 (96%), Positives = 79/79 (100%)
 Frame = +3

Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
           TRIGRAGTVRRQAVDVSPLRRVNQAIWL+CTGAREAAFRNIKT+AEC+ADELINAAKGSS
Sbjct: 152 TRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAAKGSS 211

Query: 435 NSYAIKKKDELERVAKSNR 491
           NSYAIKKKDELERVAKSNR
Sbjct: 212 NSYAIKKKDELERVAKSNR 230



 Score =  155 bits (376), Expect = 4e-38
 Identities = 78/104 (75%), Positives = 85/104 (81%), Gaps = 5/104 (4%)
 Frame = +1

Query: 1   VKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEII 180
           VKEK+A+YLPHSAGRYA KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEII
Sbjct: 67  VKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEII 126

Query: 181 HLLTGENPLQVLVTAIINSGPREDS-----LGSVVRVQFVVKPL 297
           HLLT ENPLQV V AI+NSGPREDS      G+V R    V PL
Sbjct: 127 HLLTSENPLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPL 170


>AE014297-1922|AAF55116.1|  230|Drosophila melanogaster CG7014-PA
           protein.
          Length = 230

 Score =  159 bits (386), Expect = 2e-39
 Identities = 76/79 (96%), Positives = 79/79 (100%)
 Frame = +3

Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
           TRIGRAGTVRRQAVDVSPLRRVNQAIWL+CTGAREAAFRNIKT+AEC+ADELINAAKGSS
Sbjct: 152 TRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAAKGSS 211

Query: 435 NSYAIKKKDELERVAKSNR 491
           NSYAIKKKDELERVAKSNR
Sbjct: 212 NSYAIKKKDELERVAKSNR 230



 Score =  155 bits (376), Expect = 4e-38
 Identities = 78/104 (75%), Positives = 85/104 (81%), Gaps = 5/104 (4%)
 Frame = +1

Query: 1   VKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEII 180
           VKEK+A+YLPHSAGRYA KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHAFEII
Sbjct: 67  VKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEII 126

Query: 181 HLLTGENPLQVLVTAIINSGPREDS-----LGSVVRVQFVVKPL 297
           HLLT ENPLQV V AI+NSGPREDS      G+V R    V PL
Sbjct: 127 HLLTSENPLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPL 170


>AY075413-1|AAL68236.1|  218|Drosophila melanogaster LD35371p
           protein.
          Length = 218

 Score = 36.3 bits (80), Expect = 0.026
 Identities = 27/79 (34%), Positives = 42/79 (53%)
 Frame = +3

Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
           T I R G   +  V ++  R    A+  L   ARE   R + ++ E +A E+++AA G  
Sbjct: 136 TAIKRGGVTYQVPVPITTKRSYFLAMKWLLEAAREKE-RKV-SLPEKLAWEILDAAHGQG 193

Query: 435 NSYAIKKKDELERVAKSNR 491
               IK+KD+L R+ +SNR
Sbjct: 194 R--VIKRKDDLHRLCESNR 210


>AE014134-1862|AAF52933.1|  218|Drosophila melanogaster CG5108-PA
           protein.
          Length = 218

 Score = 36.3 bits (80), Expect = 0.026
 Identities = 27/79 (34%), Positives = 42/79 (53%)
 Frame = +3

Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
           T I R G   +  V ++  R    A+  L   ARE   R + ++ E +A E+++AA G  
Sbjct: 136 TAIKRGGVTYQVPVPITTKRSYFLAMKWLLEAAREKE-RKV-SLPEKLAWEILDAAHGQG 193

Query: 435 NSYAIKKKDELERVAKSNR 491
               IK+KD+L R+ +SNR
Sbjct: 194 R--VIKRKDDLHRLCESNR 210


>AY069798-1|AAL39943.1|  172|Drosophila melanogaster SD03580p
           protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 72  PVPNRGAPYKLSNDARSEQWQKTDGRTYCQT 164
           P P+ G P K S     E+W  T  +TYCQ+
Sbjct: 114 PPPSTGRPPKRSPKPSQERWGST--KTYCQS 142


>AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynein
           protein.
          Length = 4167

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = -2

Query: 466 SSSFFLMA*ELDEPLAALINSSATHSAIVLIFLNAASRAPVHKSQIAWLTRR 311
           SS++   + E+D  +  L++ S  H + V  + + A    VH  ++ WL  R
Sbjct: 244 SSAWVFFSNEIDSSVHMLMDRSKMHESWVPYYASRALGYRVHLDRLVWLCNR 295


>AF160933-1|AAD46873.1|  756|Drosophila melanogaster LD14168p
           protein.
          Length = 756

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 88  ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLL 189
           E+L  +++   RNNG  L+AV       E+ H+L
Sbjct: 217 EKLMTNILQTVRNNGNVLIAVDTAGRVLELAHML 250


>AE014297-4305|AAN14148.1|  664|Drosophila melanogaster CG1957-PB,
           isoform B protein.
          Length = 664

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 88  ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLL 189
           E+L  +++   RNNG  L+AV       E+ H+L
Sbjct: 125 EKLMTNILQTVRNNGNVLIAVDTAGRVLELAHML 158


>AE014297-4304|AAF56844.1|  756|Drosophila melanogaster CG1957-PA,
           isoform A protein.
          Length = 756

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 88  ERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLL 189
           E+L  +++   RNNG  L+AV       E+ H+L
Sbjct: 217 EKLMTNILQTVRNNGNVLIAVDTAGRVLELAHML 250


>AE014296-116|AAN11446.1|  172|Drosophila melanogaster CG32345-PA
           protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 72  PVPNRGAPYKLSNDARSEQWQKTDGRTYCQT 164
           P P+ G P K S     E+W  T  +TYCQ+
Sbjct: 114 PPPSTGRPPKRSPKPSQERWGST--KTYCQS 142


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,360,834
Number of Sequences: 53049
Number of extensions: 499279
Number of successful extensions: 1314
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1314
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)