Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0500
         (533 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical pr...   159   2e-39
Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical pr...    32   0.23 
Z79604-3|CAD36502.1|  817|Caenorhabditis elegans Hypothetical pr...    31   0.52 
Z79604-2|CAB01900.1|  780|Caenorhabditis elegans Hypothetical pr...    31   0.52 
AF332205-1|AAK17976.1|  817|Caenorhabditis elegans nuclear recep...    31   0.52 
AF332204-1|AAK17975.1|  519|Caenorhabditis elegans nuclear recep...    31   0.52 
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical pr...    27   8.5  
Z81513-11|CAB04184.2|  254|Caenorhabditis elegans Hypothetical p...    27   8.5  

>Z68751-1|CAA92971.1|  210|Caenorhabditis elegans Hypothetical
           protein T05E11.1 protein.
          Length = 210

 Score =  159 bits (385), Expect = 2e-39
 Identities = 76/79 (96%), Positives = 79/79 (100%)
 Frame = +3

Query: 255 TRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSS 434
           TRIGRAGTVRRQAVDV+PLRRVNQAIWLLCTGAREAAFRN+KTIAEC+ADELINAAKGSS
Sbjct: 132 TRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSS 191

Query: 435 NSYAIKKKDELERVAKSNR 491
           NSYAIKKKDELERVAKSNR
Sbjct: 192 NSYAIKKKDELERVAKSNR 210



 Score =  156 bits (378), Expect = 1e-38
 Identities = 73/85 (85%), Positives = 78/85 (91%)
 Frame = +1

Query: 1   VKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEII 180
           VKEK AKYLPHSAGR+  +RFRKA CPIVERL NSLMMHGRNNGKKLM VRIVKHAFEII
Sbjct: 47  VKEKSAKYLPHSAGRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEII 106

Query: 181 HLLTGENPLQVLVTAIINSGPREDS 255
           +LLTGENP+QVLV A+INSGPREDS
Sbjct: 107 YLLTGENPVQVLVNAVINSGPREDS 131


>Z34799-2|CAA84318.1|  692|Caenorhabditis elegans Hypothetical
           protein F34D10.4 protein.
          Length = 692

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 312 RRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 491
           +RV   +    T    A  RN   + E  A+E I A +   N +A+K +   +  A SNR
Sbjct: 474 QRVQDTVQKARTAVGYAGTRNRSPLREADAEE-IAATEALKNRFAVKSRGTAKAKANSNR 532

Query: 492 *NILL-SIFTINRKL 533
              LL SI   NRK+
Sbjct: 533 GAALLESIEPTNRKI 547


>Z79604-3|CAD36502.1|  817|Caenorhabditis elegans Hypothetical
           protein ZK662.3b protein.
          Length = 817

 Score = 31.1 bits (67), Expect = 0.52
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -1

Query: 371 SECSLTCTCAQKP--DCLVDSAQG*NINGLTTNCTRTTDPSES 249
           S C+ +C C + P   C+VD      +NG ++N +  TD  E+
Sbjct: 493 STCTCSCMCGRYPPGSCIVDEVTKDLLNGGSSNSSNATDRDET 535


>Z79604-2|CAB01900.1|  780|Caenorhabditis elegans Hypothetical
           protein ZK662.3a protein.
          Length = 780

 Score = 31.1 bits (67), Expect = 0.52
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -1

Query: 371 SECSLTCTCAQKP--DCLVDSAQG*NINGLTTNCTRTTDPSES 249
           S C+ +C C + P   C+VD      +NG ++N +  TD  E+
Sbjct: 456 STCTCSCMCGRYPPGSCIVDEVTKDLLNGGSSNSSNATDRDET 498


>AF332205-1|AAK17976.1|  817|Caenorhabditis elegans nuclear receptor
           NHR-48 protein.
          Length = 817

 Score = 31.1 bits (67), Expect = 0.52
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -1

Query: 371 SECSLTCTCAQKP--DCLVDSAQG*NINGLTTNCTRTTDPSES 249
           S C+ +C C + P   C+VD      +NG ++N +  TD  E+
Sbjct: 493 STCTCSCMCGRYPPGSCIVDEVTKDLLNGGSSNSSNATDRDET 535


>AF332204-1|AAK17975.1|  519|Caenorhabditis elegans nuclear receptor
           NHR-48 protein.
          Length = 519

 Score = 31.1 bits (67), Expect = 0.52
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -1

Query: 371 SECSLTCTCAQKP--DCLVDSAQG*NINGLTTNCTRTTDPSES 249
           S C+ +C C + P   C+VD      +NG ++N +  TD  E+
Sbjct: 195 STCTCSCMCGRYPPGSCIVDEVTKDLLNGGSSNSSNATDRDET 237


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
 Frame = -1

Query: 482 FSNTLQLVLLFDGVGVR*TLSCIN*FICNTLCDCFNI-SECSLTCTCAQKPDCLVDSAQG 306
           F N  Q  + F  + +    SC    IC   C    I S+CS TC  A  P C   S   
Sbjct: 36  FCNCQQQPVFFAQISLP-ACSCQQAPICQPQCPRAEINSDCSATCVRACIPSC---SKST 91

Query: 305 *NINGLTTNCTRTTDPSESS 246
            N    +T C  T D + +S
Sbjct: 92  GNTFACSTTCESTCDKTCAS 111


>Z72503-6|CAA96594.4|  273|Caenorhabditis elegans Hypothetical
           protein C26C6.8 protein.
          Length = 273

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 319 STKQSGFCAQVHVRLHSEILKQSQSVLQ 402
           S  QSGF    HV++  EIL+Q+  V++
Sbjct: 178 SDNQSGFVPSSHVKIPHEILQQASRVIK 205


>Z98877-5|CAD56616.1|  731|Caenorhabditis elegans Hypothetical
           protein Y69H2.3c protein.
          Length = 731

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 18/58 (31%), Positives = 25/58 (43%)
 Frame = -1

Query: 422 SCIN*FICNTLCDCFNISECSLTCTCAQKPDCLVDSAQG*NINGLTTNCTRTTDPSES 249
           SC   F+ N    C N +EC  T +  + P  LVD   G   +  T   T   D S++
Sbjct: 200 SCKKGFLRNRQGQCVNPTECPATGSTDENPCNLVDCRTGHQCSMSTGKPTCVPDYSDT 257


>Z81513-11|CAB04184.2|  254|Caenorhabditis elegans Hypothetical
           protein F26D2.14 protein.
          Length = 254

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 4/74 (5%)
 Frame = -1

Query: 401 CNTLCDCFNISEC-SLTCTCAQKPDCLVDSAQG*NINGLTTNCTRTTD---PSESSRGPE 234
           C + C   N+  C      CA  P           +N    NC RT      S S+R   
Sbjct: 148 CPSACGFCNLGGCVDAVADCANDPSICNSIGMQVFVN---QNCQRTCSRCPSSTSARISS 204

Query: 233 LIMAVTSTCRGFSP 192
              ++TSTC  ++P
Sbjct: 205 STTSITSTCSSYNP 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,508,329
Number of Sequences: 27780
Number of extensions: 256536
Number of successful extensions: 697
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)