Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0498
         (571 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967...    30   1.1  
07_03_0916 + 22565620-22566463,22566566-22566792,22566892-22567509     30   1.5  
12_02_0947 + 24680119-24681497,24682213-24682275,24683380-246842...    29   3.4  

>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
            16196822-16197001,16197090-16197371,16197471-16199141,
            16199257-16199463,16199566-16199700,16199792-16200082,
            16200403-16200621,16200876-16201034,16201120-16201181,
            16201257-16201383,16201460-16201693,16201777-16202003,
            16202163-16202257,16202341-16202468,16202574-16202594,
            16202765-16202921,16203007-16203075,16203228-16203341,
            16203415-16203491,16203576-16203688,16204432-16204507,
            16204592-16204756,16204825-16204952,16205049-16205130,
            16205426-16205548,16205633-16205860,16205933-16206034,
            16206144-16206341,16206581-16206760,16206868-16207020,
            16207690-16207797,16208201-16208355,16208786-16208912,
            16209825-16209914,16209986-16210127,16210303-16210379,
            16210467-16210582,16210638-16210773,16211130-16211198,
            16211279-16211361,16211655-16211720,16211788-16211974,
            16212054-16213547,16213635-16214165,16214234-16214363,
            16214407-16215878,16216359-16216364,16216750-16217055,
            16217364-16217468,16217577-16217772,16217862-16217929,
            16218853-16220631,16221026-16221151,16221604-16221780,
            16221997-16222128,16223461-16223498,16223710-16223788,
            16224175-16224284,16224787-16224935,16225027-16225197,
            16225281-16225552,16226355-16226442,16227942-16228369
          Length = 5157

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -2

Query: 462  INLDFVWLN-CTHELRPKCYCYFLYIVFLTSPNFHPVVQSPAGCVRNV 322
            + L  +W N C H L+P C  +  Y   L   + HP+  S   C R +
Sbjct: 2427 LKLYAIWFNWCNHLLQPYCNFFENYGNILKKESDHPIWHSILECYREI 2474


>07_03_0916 + 22565620-22566463,22566566-22566792,22566892-22567509
          Length = 562

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 176 MVSSWAHPLTLFAPTGTRINAIRAREVGHHSPVRSGLLT 292
           +++S + PLT F   G   NAI  REV H   +R  LLT
Sbjct: 236 VIASGSEPLT-FGIKGVAENAIFLREVSHAQEIRRKLLT 273


>12_02_0947 +
           24680119-24681497,24682213-24682275,24683380-24684239,
           24684399-24684772,24685932-24686112,24686201-24686220
          Length = 958

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 363 HPVVQSPAGCVRNVKSGKGGTESAVSKPD 277
           HP    P     N+ +G+G TESA+S  D
Sbjct: 503 HPQTSKPYPVCDNMLNGRGNTESAISSND 531


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,103,241
Number of Sequences: 37544
Number of extensions: 283836
Number of successful extensions: 533
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)