Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0498
         (571 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S50223-1|AAB24264.2|  229|Homo sapiens HKR-T1 protein.                 31   2.2  
BT009806-1|AAP88808.1|  224|Homo sapiens zinc finger protein 22 ...    30   5.0  
BC053687-1|AAH53687.1|  224|Homo sapiens zinc finger protein 22 ...    30   5.0  
BC041139-1|AAH41139.1|  224|Homo sapiens zinc finger protein 22 ...    30   5.0  
BC010642-1|AAH10642.1|  224|Homo sapiens zinc finger protein 22 ...    30   5.0  
AY137767-1|AAN15804.1|  224|Homo sapiens Kruppel-type zinc finge...    30   5.0  
AL353801-8|CAI13068.1|  224|Homo sapiens zinc finger protein 22 ...    30   5.0  
AM082308-1|CAL06454.1|  101|Homo sapiens immunoglobulin heavy ch...    29   8.7  

>S50223-1|AAB24264.2|  229|Homo sapiens HKR-T1 protein.
          Length = 229

 Score = 31.5 bits (68), Expect = 2.2
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +3

Query: 249 EKWGITVRFDQAYSRRTR 302
           EKWG+T+RFD ++SR  R
Sbjct: 31  EKWGMTIRFDSSFSRLRR 48


>BT009806-1|AAP88808.1|  224|Homo sapiens zinc finger protein 22
           (KOX 15) protein.
          Length = 224

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 249 EKWGITVRFDQAYSRRTR 302
           +KWG+T+RFD ++SR  R
Sbjct: 31  QKWGMTIRFDSSFSRLRR 48


>BC053687-1|AAH53687.1|  224|Homo sapiens zinc finger protein 22
           (KOX 15) protein.
          Length = 224

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 249 EKWGITVRFDQAYSRRTR 302
           +KWG+T+RFD ++SR  R
Sbjct: 31  QKWGMTIRFDSSFSRLRR 48


>BC041139-1|AAH41139.1|  224|Homo sapiens zinc finger protein 22
           (KOX 15) protein.
          Length = 224

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 249 EKWGITVRFDQAYSRRTR 302
           +KWG+T+RFD ++SR  R
Sbjct: 31  QKWGMTIRFDSSFSRLRR 48


>BC010642-1|AAH10642.1|  224|Homo sapiens zinc finger protein 22
           (KOX 15) protein.
          Length = 224

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 249 EKWGITVRFDQAYSRRTR 302
           +KWG+T+RFD ++SR  R
Sbjct: 31  QKWGMTIRFDSSFSRLRR 48


>AY137767-1|AAN15804.1|  224|Homo sapiens Kruppel-type zinc finger
           protein KROX26 protein.
          Length = 224

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 249 EKWGITVRFDQAYSRRTR 302
           +KWG+T+RFD ++SR  R
Sbjct: 31  QKWGMTIRFDSSFSRLRR 48


>AL353801-8|CAI13068.1|  224|Homo sapiens zinc finger protein 22
           (KOX 15) protein.
          Length = 224

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = +3

Query: 249 EKWGITVRFDQAYSRRTR 302
           +KWG+T+RFD ++SR  R
Sbjct: 31  QKWGMTIRFDSSFSRLRR 48


>AM082308-1|CAL06454.1|  101|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 101

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
 Frame = +1

Query: 271 GSIRLTHGGLGSTFAAFDIT---NAAGRGLNY 357
           GS+RL+  G G TF+++D+T    A G+GL +
Sbjct: 19  GSLRLSCAGSGFTFSSYDMTWVRQAPGKGLEW 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,828,299
Number of Sequences: 237096
Number of extensions: 1604400
Number of successful extensions: 2968
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2967
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)