Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0497
(775 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 47 1e-05
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 6e-05
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 43 2e-04
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 43 2e-04
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.003
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 37 0.016
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.021
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.028
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 36 0.028
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.028
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.028
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.036
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 36 0.036
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.036
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.036
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 36 0.036
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.036
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.048
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 36 0.048
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.048
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.048
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 35 0.064
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 35 0.084
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 34 0.11
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 34 0.11
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 34 0.15
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.15
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.34
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.59
SB_57926| Best HMM Match : I-set (HMM E-Value=3.5e-39) 31 0.78
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 31 1.4
SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 31 1.4
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 31 1.4
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028) 30 1.8
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 30 1.8
SB_20856| Best HMM Match : Transposase_11 (HMM E-Value=2.3) 30 1.8
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 30 2.4
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 29 3.2
SB_2157| Best HMM Match : ig (HMM E-Value=9e-19) 29 4.2
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 29 4.2
SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06) 29 4.2
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 29 5.5
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 29 5.5
SB_26205| Best HMM Match : Interferon (HMM E-Value=3.4) 28 7.3
SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10) 28 9.6
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 28 9.6
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +1
Query: 229 TPSYNIQPWVQPIPLATDSLLSTDKA-GMWAVAAGYGRYSDVINPTTNTMARNVFLQTIS 405
TP V+P+ L T + + D A G GYGR + N +T R+ + +S
Sbjct: 540 TPITTFTKHVRPVCLPTSA--TPDLAVGTNCTVTGYGRVGE--NEDLSTQLRHATIPVLS 595
Query: 406 LETCRGYY-GNVVLDSNICTSGVGG-VGICRGDSGG 507
+ CR Y G+ + D IC GG + C+GDSGG
Sbjct: 596 VSECRANYSGHTINDKVICAGYEGGKIDSCKGDSGG 631
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Frame = +2
Query: 5 LQSPAACGGSILTPASILTAAHCWFDGRNRAVR---------FTVVLG-TPFLFHGGLRI 154
L CGGS++ ++TAAHC D RN R V+LG + H G I
Sbjct: 454 LDDTIVCGGSLINREWVVTAAHC-ID-RNNPSRTGCVVPDPPIRVILGESDVTKHEGNEI 511
Query: 155 --QASSIAVHHQYDFRTFANDIAMLYL 229
+ I +H Y ND+A++ L
Sbjct: 512 HRDVAQICIHPDYHEIKLTNDLALIRL 538
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 45.2 bits (102), Expect = 6e-05
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 14 PAACGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLR-IQASSIAVHHQYD 190
P CGG++++P +LTAAHC D R ++ T+ F G + I I H Y
Sbjct: 571 PHICGGNVISPWWVLTAAHCVQDERASNIKLTMGEWRLFNVDGTEQVIPVERIISHANYS 630
Query: 191 FRTFANDIAMLYLPRRIIF 247
+ T D A+L L R + F
Sbjct: 631 YNTVDYDYALLKLTRPLNF 649
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLRIQ----ASSIAVHHQYD 190
CGGS+++ ++TAAHC +N +TVV+G G +Q S I H +Y+
Sbjct: 132 CGGSLISDRWVVTAAHCIHRNKNPG-GYTVVVGA-HKKRGSTSVQQSLRLSQIIEHPKYN 189
Query: 191 FRTFANDIAMLYLPRRIIFN 250
R NDIA+L L + F+
Sbjct: 190 DRRIVNDIALLELATPVQFD 209
Score = 33.9 bits (74), Expect = 0.15
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVR-----FTVVLGTPFLFHGGLRIQ----ASSIAV 175
CGGS+++ ++TAA +N R +TVV+G G +Q S I
Sbjct: 455 CGGSLISDRWVVTAAQGIHRNKNPGGRQNPGGYTVVVGA-HKKRGSTSVQQSLRLSQIIE 513
Query: 176 HHQYDFRTFANDIAMLYLPRRIIFN 250
H +Y+ R NDIA+L L + F+
Sbjct: 514 HPKYNDRRIVNDIALLELATPVQFD 538
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +1
Query: 379 RNVFLQTISLETCRGYYGNVVLDSNICTSGV--GGVGICRGDSGG 507
+ L S E CR YG+V +++C G C GDSGG
Sbjct: 579 QQAMLPIASHENCRRKYGDVSSTAHLCAGEARSDAAGGCNGDSGG 623
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 LQSPAACGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLRIQASSIAVHHQ 184
L+ CGGS+L+P +LTAAHC N A +TV++G G + S+ H +
Sbjct: 50 LKGSHICGGSLLSPLWLLTAAHCVIRSNNSA-DYTVIVGAHKRVLDGTEHKLSTFYKHEK 108
Query: 185 Y-DFRTFANDIAMLYLPRRIIFN 250
Y + +D+A++ L + F+
Sbjct: 109 YVGGKDKKHDLALIKLAKPATFS 131
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLR-----IQASSIAVHHQY 187
CGGS++ +LTAAHC R V LG G L I+ S+I H Y
Sbjct: 417 CGGSLIHSNWVLTAAHC--ISSKRPAEVVVRLGAHSRL-GSLTTDMQDIKVSAIITHSNY 473
Query: 188 DFRTFANDIAMLYLP 232
+ RT NDIA+L LP
Sbjct: 474 NSRTMYNDIALLKLP 488
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFH---GGLRIQASSIAVHHQYDF 193
CGG+++ +LTAAHC FD + +TV +G + G + +I VH QY+
Sbjct: 1266 CGGALIAADWVLTAAHC-FDRFSMPPEWTVQVGVSDMRRRDGKGQSLSIKAIFVHPQYNS 1324
Query: 194 RTFANDIAMLYLPRRIIFN 250
+ +D+A+L L + FN
Sbjct: 1325 SSHEHDLAVLQLQQPAEFN 1343
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLRIQASSIAVHHQYDF--- 193
CGG+++TP ++TAAHC D +++ + + ++ S ++H+ D+
Sbjct: 657 CGGTLVTPEWVITAAHCVVDKNPASIQVRLGAQDRTSPDPSVEMRISIRSIHNHPDYGSP 716
Query: 194 RTFANDIAMLYLPRRIIFNH 253
+ +NDIA+L L R I H
Sbjct: 717 KRSSNDIALLRLSRPTILTH 736
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 418 RGYYGNVVLDSNICTSGVGGVGICRGDSGG 507
R Y G + D + GGV C+GDSGG
Sbjct: 789 RSYPGKISADMICAGNPEGGVDTCQGDSGG 818
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/69 (36%), Positives = 33/69 (47%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLRIQASSIAVHHQYDFRTF 202
CG S+LTP LTAAHC + A +T+V G + G S I H +
Sbjct: 266 CGASLLTPGWALTAAHC-LTLSDDASDYTLVAGAHQRENDGQVFGISKIRKHKGFSMVHV 324
Query: 203 ANDIAMLYL 229
ND+A+L L
Sbjct: 325 RNDVALLKL 333
Score = 35.1 bits (77), Expect = 0.064
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 328 GYGRYSDVINPTTNTMARNVFLQTISLETCRGYYGNVVLDSNICTSGVGGVGICRGDSGG 507
G+GR S T + + ++ TCR G V ++++ +G G C GDSGG
Sbjct: 416 GWGRISSSDQHTLADKLQQSKVPLVNYTTCRSTNGATVDENSMICAGGAGSSACNGDSGG 475
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLRIQASSIAVHHQY-DFRT 199
CGGS+L+ +LTAAHC N + +TV++G G + S+ H +Y +
Sbjct: 340 CGGSLLSSTWVLTAAHCVIRSHNTS-DYTVIVGAHKRVLDGTEHKLSAFYKHEKYVGGKD 398
Query: 200 FANDIAMLYLPRRIIFN 250
+D+A++ L + F+
Sbjct: 399 KKHDLALIRLAKPAAFS 415
Score = 28.3 bits (60), Expect = 7.3
Identities = 31/95 (32%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +1
Query: 328 GYGRYSDVINPTTNTMARNVFLQTISLETCRGYYGNVVLDSN--ICTSGVGGVGICRGDS 501
G+GR S + T + + ETC D IC G G C GDS
Sbjct: 440 GWGRVSGSMMFFMATKLQQARTPVVDHETCAIKLDKFAADKTTMICAGGSGS-SACSGDS 498
Query: 502 GGH*LLTTKEKNGSLVL--AHSWQGTAAN*VSRLF 600
GG L E G+ VL A SW GT+ + R+F
Sbjct: 499 GGP--LVCHE-GGTWVLRGAVSW-GTSHSCPGRMF 529
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 37.9 bits (84), Expect = 0.009
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLRIQ----ASSIAVHHQYD 190
CGGS++ ++TAAHC D +TVV+G G +Q + H Q+
Sbjct: 57 CGGSLIAKDWVVTAAHC-VDRNPTPSGYTVVVGAHHR-TGNTPVQNTFRLKQLFKHEQFS 114
Query: 191 FRTFANDIAMLYL 229
R NDIA+L L
Sbjct: 115 MRHLKNDIALLQL 127
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 37.1 bits (82), Expect = 0.016
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFL---FHGGLRIQASSIAVHHQYDF 193
CGGS++ +LTAAHC RN R++V +G L +I S I H +Y
Sbjct: 68 CGGSLIDSEWVLTAAHCVAGIRNPR-RYSVYVGAHELDGTTQVEEKISISKIYSHEKYSS 126
Query: 194 RTFANDIAMLYLPR 235
+D+A++ L +
Sbjct: 127 SLLTSDVALIKLSK 140
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 36.7 bits (81), Expect = 0.021
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Frame = +2
Query: 20 ACGGSILTPASILTAAHCWFDGRNRAV----RFTVVLG---TPFLFHGGLRIQ-ASSIAV 175
ACGGS+++ +LTAAHC RN + RF V LG T ++++ S I
Sbjct: 132 ACGGSLISEKWVLTAAHC-VTHRNGNILPRSRFQVQLGLYRTTLPNEPQVQLRNISEIRT 190
Query: 176 HHQYDFRTFANDIAMLYLPRRIIFN 250
H Q+D F D+A++ L I +
Sbjct: 191 HPQFDHVLFDADLALIKLDGEAIIS 215
Score = 33.1 bits (72), Expect = 0.26
Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Frame = +1
Query: 244 IQPWVQPIPLA-TD---SLLSTDKAGMWAVAAG--YGRYSDVINPTTNTMARNVFLQTIS 405
I +V+PI L TD SL+S K GM AV G GR DV + + ++
Sbjct: 214 ISEYVRPICLPETDDQASLISPSKFGM-AVGWGKTVGRQGDVSVKNLADALKETCMPIVN 272
Query: 406 LETCRGYY---GNVVLDSNICTSGV-GGVGICRGDSGG 507
C + G V + C GG IC+GDSGG
Sbjct: 273 SHVCNQAFQDEGYSVTPNMFCAGQASGGKDICQGDSGG 310
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 36.7 bits (81), Expect = 0.021
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Frame = +1
Query: 253 WVQPIPLATDSLLSTDKAGMWAVAAGYGR-YSDVINPTTNTMARNVFLQTISLETCRGYY 429
+VQP+ LA ++ W G+GR +S +P A+ L T G Y
Sbjct: 323 YVQPVCLADGTVSFPPGTECWIT--GWGRLHSGGASPEILQQAKTKLLSYAEC-TKNGSY 379
Query: 430 GNVVLDSNICTSGVGGVGICRGDSGGH*LLTTKEKNGSLVLAHSW 564
+ S + + V G+ C+GDSGG L+ +LV SW
Sbjct: 380 EAAAVSSTMLCAQVPGIDTCQGDSGGP-LVCENNNKWTLVGVTSW 423
Score = 31.5 bits (68), Expect = 0.78
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 507 PLTINHQGKEWLIGVSSFVARDGC-ELGFPSVFASVPSFRAWIQHHM 644
PL + K L+GV+S+ GC +P ++A + + W+ HHM
Sbjct: 406 PLVCENNNKWTLVGVTSWGY--GCAHPDYPGIYAKLTELKDWVFHHM 450
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVV-LG---TPFLFHGGLRIQASSIAVHHQYD 190
CGG+++ ++TA+HC D R + ++ LG + RI + I +H Y+
Sbjct: 240 CGGALVHEDWVVTASHCINDIRPEDYKTHIISLGGHNKTGIMSVEQRIGIAKIYLHADYN 299
Query: 191 F--RTFANDIAMLYLPRRII 244
+ ND+A++ L + I
Sbjct: 300 LYPHQYNNDVALIRLAKPAI 319
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 36.3 bits (80), Expect = 0.028
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLG 121
CGGS++ P ILT++HC++ N + +F + LG
Sbjct: 15 CGGSLIDPYWILTSSHCFWTYNNISTQFEIRLG 47
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +1
Query: 256 VQPIPLATDSLLSTDKAGMWAVAAGYGRYSDVINPTTNTMARNVFLQTISLETCRGYYGN 435
V + L S D AG + G+GR ++ N + + R ++ +S +TC Y
Sbjct: 364 VHSVCLPEKSWSPPDGAGCYVT--GWGRTAE--NEGYSDVLREAQVRLVSRDTCNASYSG 419
Query: 436 VVLDSNICTSGVGG 477
++ + IC GG
Sbjct: 420 IINERYICAGYPGG 433
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 36.3 bits (80), Expect = 0.028
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 328 GYGRYSDVINPTTNTMARNVFLQTISLETCRGYYGNVVLDSNICTS-GVGGVGICRGDSG 504
G+G + N M +V L +S C Y N + DS +C GG+ C+GDSG
Sbjct: 80 GWGTLASGGNQPNKLMQASVPL--VSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSG 137
Query: 505 G 507
G
Sbjct: 138 G 138
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLRI 154
CGGS++ P +LTAAHC + + + +++ LF +R+
Sbjct: 286 CGGSLIHPEWVLTAAHCLENTQPSDIEISLITRAFILFIEVMRL 329
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 36.3 bits (80), Expect = 0.028
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLG 121
CGGS++ P ILT++HC++ N + +F + LG
Sbjct: 275 CGGSLIDPYWILTSSHCFWTYNNISTQFEIRLG 307
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAV 100
CGGSI+ P ++TA HC RA+
Sbjct: 10 CGGSIIDPHWVVTAGHCVVPWSPRAI 35
Score = 29.5 bits (63), Expect = 3.2
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +1
Query: 256 VQPIPLATDSLLSTDKAGMWAVAAGYGRY---SDVINPTTNTMARNVFLQTISLETCRGY 426
+QPI L D + AG G+G S V +PT + V L S+
Sbjct: 96 IQPICLPQDD--TEFPAGKMCYLTGWGETVLDSGVFSPTLKQL--KVPLVNKSVCNSNNS 151
Query: 427 YGNVVLDSNICTS-GVGGVGICRGDSGGH*LLTTKEKNGSLVL 552
Y ++ + +C GG C GDSGG L+ + ++G VL
Sbjct: 152 YSGIIHEQFMCAGYNQGGQDGCLGDSGGP--LSCQTESGDWVL 192
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 36.3 bits (80), Expect = 0.028
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 328 GYGRYSDVINPTTNTMARNVFLQTISLETCRGYYGNVVLDSNICTS-GVGGVGICRGDSG 504
G+G + N M +V L +S C Y N + DS +C GG+ C+GDSG
Sbjct: 424 GWGTLASGGNQPNKLMQASVPL--VSQSKCNTAYPNKIHDSMLCAGLDAGGIDACQGDSG 481
Query: 505 G 507
G
Sbjct: 482 G 482
Score = 31.9 bits (69), Expect = 0.59
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLRI 154
CGGS++ P +LTAAHC + + + +++ LF +R+
Sbjct: 246 CGGSLIHPEWVLTAAHCLENTQPSDIEISLITRAFILFIEVMRL 289
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 35.9 bits (79), Expect = 0.036
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLG---TPFLFHGGLRIQASSIAVHHQYDF 193
CGGS++ P +LTAAHC + A ++ VVLG + I + + H+ Y
Sbjct: 58 CGGSLVAPGWVLTAAHCILS--DDASKYKVVLGDVDRKKIEGSEQMIDVAMVIKHYAYGN 115
Query: 194 RT-FANDIAMLYL 229
AND+A+L L
Sbjct: 116 PVPNANDVALLKL 128
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 35.9 bits (79), Expect = 0.036
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 328 GYGRYSDVINPTTNTMARNVFLQTISLETCRGYYGNVVLDSNICTS-GVGGVGICRGDSG 504
G+GR S +T + V + S C Y N + DS IC GG+ C+GDSG
Sbjct: 30 GWGRLSS--GGSTPDYLQQVSVPIRSRARCDSSYPNKIHDSMICAGIDKGGIDACQGDSG 87
Query: 505 G 507
G
Sbjct: 88 G 88
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 35.9 bits (79), Expect = 0.036
Identities = 26/61 (42%), Positives = 32/61 (52%)
Frame = +2
Query: 5 LQSPAACGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLRIQASSIAVHHQ 184
L S ACGGS++ I+TAAHC FD NR +R+ VV G S+I H Q
Sbjct: 60 LDSAQACGGSLVPEDWIVTAAHC-FDS-NR-LRWRVVAGNDMPSKAVNTTGVSAIWRHPQ 116
Query: 185 Y 187
Y
Sbjct: 117 Y 117
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +1
Query: 325 AGYGRYSDVINPTTNTMARNVFLQTISLETCRGY--YGNVVLDSNICTSG-VGGVGICRG 495
AG+GR S + R V + + E C YG V+ + +C GG G C+
Sbjct: 169 AGWGRRS--FGGEQSLALREVQVHMVPRELCNSANSYGGVIHERALCAGPREGGCGPCQF 226
Query: 496 DSGG 507
DSGG
Sbjct: 227 DSGG 230
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 35.9 bits (79), Expect = 0.036
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 8 QSPAACGGSILTPASILTAAHCWFDGRNRAVRFTVVLG 121
++P CGGS++ P I+TAAHC+ ++ A +T+ +G
Sbjct: 130 KTPHICGGSVVAPEWIVTAAHCFAYSKD-AKDYTIAVG 166
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +1
Query: 400 ISLETCRGYYGNV---VLDSNICTS-GVGGVGICRGDSGG 507
+S +TC+ Y ++ V C G GG+ C+GDSGG
Sbjct: 260 VSRDTCQKAYNDLHYKVSSRMRCAGYGAGGIDACQGDSGG 299
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGG 145
CGGS++TP +LTAAHC D +TVV+G GG
Sbjct: 63 CGGSLITPEWVLTAAHC-VDHYPYPGAYTVVVGWGRTVGGG 102
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 35.9 bits (79), Expect = 0.036
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGT---PFLFHGGLRIQASSIAVHHQYDF 193
CG +++ P +TAAHC R ++TV++G+ I+ + H +
Sbjct: 353 CGATLIRPGWAITAAHCVM----RPDKYTVIVGSHSRDASEPSAQNIKVRRVYRHRGFSM 408
Query: 194 RTFANDIAMLYLPRRIIFN 250
+ +DIA+L L R + N
Sbjct: 409 ANYVDDIALLELERSAVIN 427
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 152 IQASSIAVHHQYDFRTFANDIAMLYLPRRIIFN 250
I S + H +YD R NDIA+L L R + F+
Sbjct: 152 IPVSHVIEHPEYDDRKIKNDIALLELSRPVKFD 184
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 35.5 bits (78), Expect = 0.048
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLF--HGGLRI-QASSIAVHHQYDF 193
CGGS+++P ++TAAHC G + + VV G G + I H Y+
Sbjct: 93 CGGSLVSPTWVVTAAHC-IAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVKRIITHPTYNS 151
Query: 194 RTFANDIAMLYL 229
+NDIA++ L
Sbjct: 152 PQLSNDIALIEL 163
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 295 TDKAGMWAVAAGYGRYSDVINPTTNTMARNVFLQTISLETCRGYYGNVVLDSNICTS-GV 471
TD W G+GR + T + + + +S C Y + DS +C
Sbjct: 820 TDGTRCWIT--GWGRLAS--GGTAPDILQQASVPVVSRARCEKAYPGKIHDSMLCAGLDQ 875
Query: 472 GGVGICRGDSGG 507
GG+ C+GDSGG
Sbjct: 876 GGIDTCQGDSGG 887
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 23 CGGSILTPASILTAAHC 73
CGGS++ P +LTA HC
Sbjct: 690 CGGSLIHPQWVLTATHC 706
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 35.5 bits (78), Expect = 0.048
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGL----------RIQASSIA 172
C G +++ ++TAAHC FD R + V LG G L I ++I
Sbjct: 1114 CSGVLISARHVITAAHC-FDRIIRTDQIIVRLGAYIARSGRLDWGMGSRWEQEIAVAAIH 1172
Query: 173 VHHQYDFRT-FANDIAMLYLPRRIIFN 250
H Y T +ANDIA+L L R I N
Sbjct: 1173 KHPSYQAPTRWANDIAVLKLARPAILN 1199
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 35.5 bits (78), Expect = 0.048
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 4/80 (5%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFL---FHGGLRIQASSIAVHHQYDF 193
CGG+++ P ++TAAHC + R F + +G F + S + H Y
Sbjct: 166 CGGTLVHPQWVITAAHCVY--RRGPNDFKIRMGAHFRKGDYGTEQDFSLSRVITHPSYHK 223
Query: 194 RT-FANDIAMLYLPRRIIFN 250
T +A+DIA++ L + + N
Sbjct: 224 PTRYAHDIALIELAKPAVIN 243
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 35.5 bits (78), Expect = 0.048
Identities = 37/117 (31%), Positives = 49/117 (41%), Gaps = 14/117 (11%)
Frame = +1
Query: 268 PLATDSLLST-------DKA--GMWAVAAGYGRY-SDVINPTTNTMARNVFLQTISLETC 417
PLA D +ST D+A G+ G+GRY S + NP + R + + TC
Sbjct: 38 PLAVDKKVSTACLPQQGDRANPGLKCYITGWGRYHSTITNPAKSL--RQSLVPLVDHVTC 95
Query: 418 RGYYGNVVLDSN--ICTSGVGGVGICRGDSGGH*LLTTKEKNGSLVL--AHSWQGTA 576
+ LD +C G G C GDSGG E+ G VL SW T+
Sbjct: 96 KRGLKEFYLDEETMMCVGGAGS-SACNGDSGGP---LVCEEGGKWVLRGVASWVATS 148
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 35.1 bits (77), Expect = 0.064
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGL---RIQASSIAVHHQYDF 193
CGGS+++ ++TAAHC N A ++ +++G + + + H QY+
Sbjct: 502 CGGSLVSSTWVVTAAHCVARSSNPA-QYQIIVGEHNRNVNEVTEETLNVKKVIAHPQYNN 560
Query: 194 RTFANDIAMLYL 229
+NDIA++ L
Sbjct: 561 PRLSNDIALIEL 572
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 35.1 bits (77), Expect = 0.064
Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFT--------VVLGTPFLFH---GGLRIQASSI 169
CGGSI+ I+TAAHC A R+T V LG L+ I I
Sbjct: 1809 CGGSIVNSQWIVTAAHCVTTKPPGASRYTMYAFSDLNVTLGEHQLYQLDGSEQNIPIEGI 1868
Query: 170 AVHHQYDFRTFANDIAMLYLPRRIIFNHGYSQ 265
VH Y+ + DIA+L L + I FN SQ
Sbjct: 1869 VVHPSYNDLDY--DIALLKLRQPITFNAYVSQ 1898
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 304 AGMWAVAAGYGRYSDVINPTTNTMARNVFLQTISLETCRGYYGNVV-LDSNICTSGVGGV 480
AG +G+GR + +P +N + + + + C Y N+ + + + +G+ G
Sbjct: 1908 AGTPCYVSGWGRIGES-SPGSNVL-QEASIPLVDQRACEEQYRNLKPITARMRCAGIYGT 1965
Query: 481 --GICRGDSGG 507
G C+GDSGG
Sbjct: 1966 PKGTCKGDSGG 1976
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 34.7 bits (76), Expect = 0.084
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +1
Query: 301 KAGMWAVAAGYGRYSDVINPTTNTMARNVFLQTISLETC--RGYYGNVVLDSNICTS-GV 471
K G +G+G + T+ + + + +S + C + YG+ + ++ +C
Sbjct: 342 KPGTKCTISGWGALQEGAGSTSKVLMQ-AKVPLVSRDQCSHQQSYGDRITENMLCAGMRQ 400
Query: 472 GGVGICRGDSGGH*LLTTKE--KNGSLVLAHSW 564
GGV C+GDSGG + T E + +LV SW
Sbjct: 401 GGVDSCQGDSGGPFVCTNPENPRQWTLVGVTSW 433
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLG 121
CGG++LT +LTAA C+ D + RA + V+LG
Sbjct: 284 CGGTLLTSEWVLTAARCFRDNK-RAGEWKVILG 315
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLR--IQASSIAVHHQYDFR 196
CG S+L+P LTAAHC N A +T+ G + ++ S + H ++
Sbjct: 111 CGASLLSPGWALTAAHCVQRSSNPA-DYTLAAGAHRRVNDAHAQVLRVSQVISHKEFSMG 169
Query: 197 TFANDIAMLYL 229
ND+ +L L
Sbjct: 170 HLRNDVTLLRL 180
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGT-PFLFHGGLRIQ--ASSIAVHHQYDF 193
CGGS++ P ILTA HC R +A + LG + G + + H Y
Sbjct: 37 CGGSLIAPQWILTATHC--VERKQASSIVIRLGARRRVATVGTEKDYIVTKVITHPSYHK 94
Query: 194 -RTFANDIAMLYLPRRIIF 247
+T+++DIA+L L + +++
Sbjct: 95 PKTYSHDIALLKLDKPVLY 113
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGT 124
CGG++++P +LTA HC G+ +TVV+GT
Sbjct: 461 CGGTLISPDWVLTAGHC-VHGQLDPSGYTVVVGT 493
Score = 31.5 bits (68), Expect = 0.78
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Frame = +1
Query: 313 WAVAAGYGRYSDVINPTTNTMA-------RNVFLQTISLETCRGYYGNVVLDSNICTSGV 471
W V A + + D +NP + + + L S E CR YG+V +++C
Sbjct: 881 WVVTASHCIHDD-LNPGSYMVVVAISRHPQQAMLPIASHENCRRKYGDVSSTAHLCAGEA 939
Query: 472 --GGVGICRGDSGG 507
G C GDSGG
Sbjct: 940 RSDAAGGCNGDSGG 953
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVV 115
CGG++++ ++TA+HC D N VV
Sbjct: 872 CGGALISDRWVVTASHCIHDDLNPGSYMVVV 902
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 33.9 bits (74), Expect = 0.15
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 23 CGGSILTPASILTAAHC 73
CGGS++TP +LTAAHC
Sbjct: 106 CGGSLITPEWVLTAAHC 122
Score = 28.3 bits (60), Expect = 7.3
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +1
Query: 292 STDKAGMWAVAAGYGRYSDVINPTTNTMARNVFLQTISLETC---RGYYGNVVLDSNICT 462
S + G G+GR P+ + + L S C Y V S IC
Sbjct: 189 SRAQVGAQCFITGWGRLVGGGQPSE--ILQQAMLPVASHSACDRKNSYLVPVEEKSMICA 246
Query: 463 SGVGGVGICRGDSGG 507
G+G +G C+GDSGG
Sbjct: 247 GGMG-MGGCQGDSGG 260
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLRIQASSIAVHHQYDFR-T 199
CGGS++ P +LTAAHC + + + I+ + I H Y
Sbjct: 57 CGGSLIDPGWVLTAAHCLVGEQPDSALLGAHYRSNKTVGTEKDIKVAQIIPHKNYHSPIE 116
Query: 200 FANDIAMLYL 229
ANDIA+L L
Sbjct: 117 MANDIALLKL 126
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 400 ISLETC-RGYYGNVVLDSNICTS-GVGGVGICRGDSGGH*LLTTKEKNG 540
+S C G Y + +S +C GGV C+GDSGG L ++ NG
Sbjct: 182 VSKSRCDTGNYTGKIHESMLCAGLEQGGVDSCQGDSGGP--LVCEDTNG 228
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 31.9 bits (69), Expect = 0.59
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLG--TPFLFHGGLRIQASSIAVHHQYDFR 196
CGGS++ P +LTA HC ++ VVLG G +I + H + R
Sbjct: 88 CGGSLIAPQWVLTAGHCIL--TEDPEKYRVVLGDVDRDTTEGSEQIFHVRRIIKHPHYSR 145
Query: 197 --TFANDIAMLYLPR 235
+ ND+A+L L R
Sbjct: 146 DVPYDNDVALLQLSR 160
>SB_57926| Best HMM Match : I-set (HMM E-Value=3.5e-39)
Length = 788
Score = 31.5 bits (68), Expect = 0.78
Identities = 16/30 (53%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = +1
Query: 103 FHCRT-GNPIPVPWWLKDSSVFHCSSSSIR 189
F C+T GNP P W K SSV SS S R
Sbjct: 344 FDCQTRGNPTPTVTWWKGSSVIDISSPSTR 373
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 31.5 bits (68), Expect = 0.78
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRN 91
C G++++P +LTAAHC GR+
Sbjct: 168 CTGTLVSPRHVLTAAHCLHTGRD 190
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 31.5 bits (68), Expect = 0.78
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +2
Query: 23 CGGSILTPASILTAAHC--WFDGRNRAVRFTVVLGTPFLF--HGGLRIQ---ASSIAVHH 181
CGG+++ +LTAAHC + D V LG + H +Q ++ I H
Sbjct: 1192 CGGTLIAEDWVLTAAHCVVYKDSGIPYHGLRVFLGVHDITARHMDEHVQIIPSAGIYSHP 1251
Query: 182 QYDFRTFANDIAMLYL 229
++ +RT+ +DIA++ L
Sbjct: 1252 RFSWRTYDSDIALIRL 1267
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLR------IQASSIAVHHQ 184
CGG+++ ++TAAHC F + + V+LG F+ ++ S++ +H +
Sbjct: 73 CGGALIDREWVVTAAHCVFQEPD-VSHYKVILGD---FNRDIKEPTEQEFDVSTLHLHQR 128
Query: 185 Y-DFRTFANDIAMLYLPRRIIFN 250
+ + + DIA+L L R + N
Sbjct: 129 FLTDKGYGYDIALLKLSRPAVIN 151
>SB_32584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/68 (26%), Positives = 28/68 (41%)
Frame = +1
Query: 160 VFHCSSSSIRLQNVCK*HCNAVLTPSYNIQPWVQPIPLATDSLLSTDKAGMWAVAAGYGR 339
V H + + + + HC Y W P+ + T S S D +G W + G G
Sbjct: 498 VHHTFTKPGQRRTASRGHCPGTYA-IYAAYSWGIPLAIVTISF-SVDLSGSWRIGYGRGE 555
Query: 340 YSDVINPT 363
Y + NP+
Sbjct: 556 YCFIENPS 563
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 328 GYGRYSDVINPTTNTMARNVFLQTISLETCRGYYGNVVLD-SNICTSGV--GGVGICRGD 498
G+GR D P + + + + S E C+ YG+ + +++C G C+GD
Sbjct: 72 GWGRQVDSSGPLPDIL-QQARIPIASHEDCKRKYGSGIYSYTHLCAGEAKPNAAGACQGD 130
Query: 499 SGG 507
SGG
Sbjct: 131 SGG 133
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 370 TMARNVFLQTISLETCRGYYGNVVLDSNICTSGV-GGVGICRGDSGG 507
T+ V + +S TC Y + +S +C GG+ C+GDSGG
Sbjct: 13 TVLMQVEVPIVSASTCSRAYSRLH-ESMVCAGRASGGIDSCQGDSGG 58
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGT--PFLFHGGLRIQASSIAVHHQY-DF 193
CGG+++ ++TAAHC F + + + LG G L I ++I +H ++
Sbjct: 314 CGGTLIDTEWVVTAAHCVFQNIEPS-NYKIKLGAHDRESSEGALTIPVTAIHMHTRFMTD 372
Query: 194 RTFANDIAMLYLPRRIIFNHGYS 262
++ DIA++ L H S
Sbjct: 373 GSYGYDIAIMKLANPAPIGHTIS 395
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +1
Query: 301 KAGMWAVAAGYGRYSDVINPTTNTMARNVFLQTISLETCRGYYGNVVLDSNICTS-GVGG 477
K G G+G+ S + + + + + + C Y + +S +C GG
Sbjct: 445 KEGDRCYITGWGKLSS--HGSAPDILQQATVPVVGRARCMKAYRGQIHESMLCAGLDAGG 502
Query: 478 VGICRGDSGG 507
V C+GDSGG
Sbjct: 503 VDACQGDSGG 512
>SB_50354| Best HMM Match : Trypsin (HMM E-Value=0.0028)
Length = 333
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVL 118
C G+++ P ++TAAHC +G+ T +L
Sbjct: 153 CSGTLIGPCHVITAAHCIHNGKWFVSPLTAIL 184
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 23 CGGSILTPASILTAAHC-WFDGRNRAVRFTVVLG--TPFLFHGG-LRIQASSIAVHHQYD 190
CGG+++ ++TAAHC ++DG+ V LG L G ++AS++ +H +
Sbjct: 749 CGGALIARDWVVTAAHCFYYDGKIVPSDILVRLGEHDRTLEEGSEQNVRASNLVLHPLAN 808
Query: 191 FRTFANDIAMLYL 229
D+A++ L
Sbjct: 809 KNGLDFDVALIQL 821
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +1
Query: 265 IPLATDSLLSTDKAGMWAVAAGYGRY----SDVINPTTNTMARNVFLQTISLETCRGYYG 432
+P TD++L + G + AG+G + V + + + V L +S C+ +
Sbjct: 836 LPQPTDAILV--RPGSVGIVAGWGSTQKGDASVRSGPPYPVLKQVQLPFVSHRVCQVNHT 893
Query: 433 NVVLDSNICTSGVGGV-GICRGDSGGH*LLTTKEKNGSLVLAHSW 564
N + C V G C+GDSG ++ + + S V SW
Sbjct: 894 NAITKRMRCAGDVMGERDACKGDSGSPIVVKRTDGSWSAVGLSSW 938
>SB_20856| Best HMM Match : Transposase_11 (HMM E-Value=2.3)
Length = 449
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 601 KTDGKPNSQPSLATNELTP--MSHSFPWWLIVN 509
+ +PNS SLA N TP MS FP W ++N
Sbjct: 45 RRSSRPNSAQSLAFNNATPLDMSAIFPGWRMLN 77
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +1
Query: 439 VLDSNICTSGVGGVGICRGDSGGH*LLTTKEKNGSLVL 552
VLD ++ +G G IC GDSGG E+NG VL
Sbjct: 128 VLDKSMVCAGGAGSSICHGDSGGP---LQCEENGHWVL 162
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 23 CGGSILTPASILTAAHC 73
CGGS++ P ILTA HC
Sbjct: 80 CGGSLIHPQWILTATHC 96
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 14 PAACGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGGLR--IQASSIAVHHQY 187
P C G ++ P +LTAAHC + + ++ FL G+ S A+ H++
Sbjct: 121 PWGCTGVLVGPKHVLTAAHCVANEKPHNLK------VGFLQRNGMMNWYSVSRFAMSHKW 174
Query: 188 DFRTFANDIAMLYL 229
A+D A++ L
Sbjct: 175 RKNDIASDYALIVL 188
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +2
Query: 23 CGGSILTPASILTAAHC 73
CGG++++P ++TAAHC
Sbjct: 377 CGGTLVSPQWVVTAAHC 393
>SB_2157| Best HMM Match : ig (HMM E-Value=9e-19)
Length = 603
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Frame = +1
Query: 52 HLNCSSLLVRWKKSCSTFHCRT-GNPIPVPWWLKDSSVFHCSSSSIRL 192
HL L + + TFHC G P P WLKD V + RL
Sbjct: 168 HLFTPPLQILTRDQPQTFHCYADGQPAPRLAWLKDDHVIGENQKGYRL 215
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 100 TFHCRT-GNPIPVPWWLKDSSVFHCS 174
TF C T GNP P WLK+ S + S
Sbjct: 881 TFECHTKGNPPPTVTWLKNGSALNTS 906
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 5 LQSPAACGGSILTPASILTAAHCWFDGRNRA--VRFTVVLG 121
L C GS++ I+TA HC+ D R+ A ++ V+LG
Sbjct: 73 LNDRQVCAGSLIEARWIITAGHCFKDPRSSADPDKWKVLLG 113
>SB_17195| Best HMM Match : Trypsin (HMM E-Value=4.9e-06)
Length = 379
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHGG 145
C G++++ +LT+AHC +G++ R T L FL G
Sbjct: 168 CSGTLISRQHVLTSAHCVHNGKSYLQR-TSALRVGFLKRSG 207
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 28.7 bits (61), Expect = 5.5
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWF 79
CGG+++ +LTAAHC++
Sbjct: 157 CGGALINREWVLTAAHCFY 175
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 28.7 bits (61), Expect = 5.5
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCWFDGRNRAVR-FTVVLGTPFLFHG---GLRIQASSIAVHHQYD 190
CGG+++ ++T AHC+ + R + V LG L R SI VH Y
Sbjct: 54 CGGALVHERWVVTGAHCFNPYTSEDPRDWNVTLGEYNLAVNESFEQRRGVKSITVHEHYK 113
Query: 191 FRTFAN--------DIAMLYLPRRIIFN 250
F DIA++ L R ++FN
Sbjct: 114 SMWFEGITDTPPMFDIALIELDRPVVFN 141
>SB_26205| Best HMM Match : Interferon (HMM E-Value=3.4)
Length = 464
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 483 YLPRRFWRPLTINHQGKEWLIGVSSFVARDGCELGF 590
YL F +P +N +W++G + F + C LG+
Sbjct: 41 YLKHVFGQPYDVNFYAGDWMLGPNLFCWQPICYLGY 76
>SB_13844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Frame = +1
Query: 391 LQTISLETCRGYYGNVVLDSNICT-SG-VGGVGICRGDSGGH*LLTTKEKNGSLVLAHSW 564
L +S C+ Y V +++C SG G C GDSGG E+ G +L W
Sbjct: 2 LPLVSNAECQRKYSKVNAKAHLCACSGQAASSGGCNGDSGG---ALVCEEGGRSILRGGW 58
Query: 565 QGT 573
T
Sbjct: 59 PTT 61
>SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10)
Length = 948
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 220 HCNV-ICKRSEVVLMMNCNGRRLNP*ATMEQEWGSQYDSETY 98
H N +C+ S +L+ NC G + ++ W ++Y +E +
Sbjct: 216 HSNAEVCRYSVTILVRNCFGYHVYRFKKLDASWNARYCAENF 257
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +2
Query: 20 ACGGSILTPASILTAAHCWFDGRNRAVRFTVVLGTPFLFHG 142
+CGG++++ ++TAAHC + V + V+ G +F G
Sbjct: 501 SCGGALISSKWVITAAHCVIEYPFPQV-YEVIAGWGRVFEG 540
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 23 CGGSILTPASILTAAHCW 76
CGGS++ ++TAAHC+
Sbjct: 53 CGGSVIKSQWVVTAAHCF 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,036,790
Number of Sequences: 59808
Number of extensions: 583552
Number of successful extensions: 1552
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1547
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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