Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0497
         (775 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              29   0.036
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    29   0.048
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               24   1.4  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   7.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   7.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   7.3  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   9.6  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   9.6  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   9.6  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.6  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 29.5 bits (63), Expect = 0.036
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +1

Query: 97  STFHCRT-GNPIPVPWWLKDSSVFHCSSSSIRLQNVCK 207
           +TF C   GNPI    WLKD        + +R+++V K
Sbjct: 325 ATFTCNVRGNPIKTVSWLKDGKPLGLEEAVLRIESVKK 362


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 29.1 bits (62), Expect = 0.048
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 23  CGGSILTPASILTAAHCWFDGRNRAVRFTVVLG 121
           CG +I++   +LTAAHC  D      +  +V+G
Sbjct: 188 CGATIISKRYVLTAAHCIID--ENTTKLAIVVG 218


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 270 WNWLYPWLNII 238
           WNW+Y W  +I
Sbjct: 627 WNWVYEWKELI 637



 Score = 21.8 bits (44), Expect = 7.3
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -2

Query: 264 WLYPWLNIIR 235
           W++PWL ++R
Sbjct: 542 WIHPWLPLLR 551


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 132 RNGVPSTTVKRTARFLPSN 76
           RNG   TT+  T  F P N
Sbjct: 297 RNGPTQTTLNATTLFCPPN 315


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 164 KTLESLSHHGTGMGFPVR 111
           K +++ SHH T  G P+R
Sbjct: 565 KMIQACSHHLTHKGKPIR 582


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 132 RNGVPSTTVKRTARFLPSN 76
           RNG   TT+  T  F P N
Sbjct: 387 RNGPTQTTLNATTLFCPPN 405


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 499 SGGH*LLTTKEKNGSLVLAHSWQGTAAN 582
           SGG  L  TKE N   ++A S+   + N
Sbjct: 441 SGGSVLRATKEYNTVPIIAESYGSGSTN 468


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 499 SGGH*LLTTKEKNGSLVLAHSWQGTAAN 582
           SGG  L  TKE N   ++A S+   + N
Sbjct: 441 SGGSVLRATKEYNTVPIIAESYGSGSTN 468


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 499 SGGH*LLTTKEKNGSLVLAHSWQGTAAN 582
           SGG  L  TKE N   ++A S+   + N
Sbjct: 441 SGGSVLRATKEYNTVPIIAESYGSGSTN 468


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 654 IKISCDVGSRP*RKVRWRKQTGNL 583
           ++I CDV   P   + WR+   +L
Sbjct: 328 VEIKCDVTGTPPPPLVWRRNGADL 351


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,368
Number of Sequences: 438
Number of extensions: 5542
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)