Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0496
         (729 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q09F66 Cluster: Ymf75; n=1; Tetrahymena paravorax|Rep: ...    36   1.3  
UniRef50_Q4FPE2 Cluster: Possible transmembrane protein; n=2; Ca...    34   3.1  
UniRef50_UPI00015BCE4B Cluster: UPI00015BCE4B related cluster; n...    33   9.5  

>UniRef50_Q09F66 Cluster: Ymf75; n=1; Tetrahymena paravorax|Rep:
           Ymf75 - Tetrahymena paravorax
          Length = 187

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +2

Query: 221 HIIVATLLGRYYGKMFQRFFLIDCMLIIWYSINN*FYLRNFIIAYVFSIHYLNNLIFF-- 394
           HI + T +       F++  L    +I +Y  N    L N +I Y+F+  Y NNLI++  
Sbjct: 102 HIYIITTIKHIIDFNFKKLILFTNFIINYYKSN----LINNLIIYIFNYFYKNNLIWYTL 157

Query: 395 FKTFSL 412
           FKT S+
Sbjct: 158 FKTHSI 163


>UniRef50_Q4FPE2 Cluster: Possible transmembrane protein; n=2;
           Candidatus Pelagibacter ubique|Rep: Possible
           transmembrane protein - Pelagibacter ubique
          Length = 312

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +2

Query: 326 FYLRNFIIAYVFSIHYLNNLIFFFKTFSL*NL 421
           F   N+II+++F I  L N+ FF K F L NL
Sbjct: 168 FIENNYIISFIFLISLLTNIYFFLKDFKLVNL 199


>UniRef50_UPI00015BCE4B Cluster: UPI00015BCE4B related cluster; n=1;
           unknown|Rep: UPI00015BCE4B UniRef100 entry - unknown
          Length = 319

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
 Frame = +2

Query: 62  IIKLFTDFK*NYWILTKYIF---KS*FYYILNVI-R*YYIHSITFYST 193
           I+ L+T  K NYWI  +Y     K  FY  LN I R Y +H++ F+S+
Sbjct: 33  ILNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSS 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,045,283
Number of Sequences: 1657284
Number of extensions: 10901281
Number of successful extensions: 16121
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16114
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)