Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0496
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.8  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      21   7.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -3

Query: 67   YYPLKKCNNFYL 32
            YYP + C++FY+
Sbjct: 1212 YYPHESCSSFYV 1223


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 305 ILLTYNQLKKNVETFFR 255
           + +++NQ  +NV+TF R
Sbjct: 34  VWVSFNQTAQNVDTFVR 50


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 727 LLKASSKYATFRAIVDSTKTFGRSNFLLISIF 632
           L+KA SKY     ++     FG+ N  + S F
Sbjct: 183 LIKAFSKYQFVVLVLQLQHRFGKINRTMRSFF 214


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 727 LLKASSKYATFRAIVDSTKTFGRSNFLLISIF 632
           L+KA SKY     ++     FG+ N  + S F
Sbjct: 183 LIKAFSKYQFVVLVLQLQHRFGKINRTMRSFF 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,834
Number of Sequences: 336
Number of extensions: 3374
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)