Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0494
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.5  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    23   2.5  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    23   2.5  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.3  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   5.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.6  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +2

Query: 356 SSIEKGE*IRHQSCFGSCTKSYIKRKCLVPRSSQWQRKILQLFRLGRRNH 505
           S++E        SC GS T S +   CL    + +  K  QL  L +  H
Sbjct: 226 SALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNK--QLTELEKEFH 273


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +2

Query: 356 SSIEKGE*IRHQSCFGSCTKSYIKRKCLVPRSSQWQRKILQLFRLGRRNH 505
           S++E        SC GS T S +   CL    + +  K  QL  L +  H
Sbjct: 15  SALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNK--QLTELEKEFH 62


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = +2

Query: 356 SSIEKGE*IRHQSCFGSCTKSYIKRKCLVPRSSQWQRKILQLFRLGRRNH 505
           S++E        SC GS T S +   CL    + +  K  QL  L +  H
Sbjct: 15  SALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFTNK--QLTELEKEFH 62


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 356 SSIEKGE*IRHQSCFGSCTKSYIKRKCL 439
           S++E  +     SC GS T S +   CL
Sbjct: 226 SALESPDPASRSSCLGSNTSSMLSLNCL 253


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -3

Query: 522 LFPFSL*FRLPKRNNCNIFRC 460
           L+P+++ FR+P R + N+  C
Sbjct: 336 LWPYTMYFRMPHRCHGNLQSC 356


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 542 LSHFRGSAWEYKEEVGKYYLHQF 610
           L H   S +   EEV   +LHQF
Sbjct: 111 LQHLHQSKFNPHEEVKLQHLHQF 133


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +3

Query: 342 MEDFEALLKKANELDIKVVLDLVPNH 419
           M  ++ +  +    ++ VVLD++P H
Sbjct: 1   MHFYDKMFNQEQNNNVPVVLDVIPPH 26


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 148  QIYPRSFADSDGDGIGDLNGITSKLEYIKELGVG 249
            +I P ++         D+  I  K E+IK +G+G
Sbjct: 2125 RIGPYAYLRDQWVSFDDIGMIRHKSEFIKAMGLG 2158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,697
Number of Sequences: 336
Number of extensions: 4435
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)