Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0494
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    59   3e-09
Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical pr...    57   1e-08
Z35663-6|CAD82917.1|  606|Caenorhabditis elegans Hypothetical pr...    45   6e-05
Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical pr...    45   6e-05
Z30215-4|CAA82936.1|  541|Caenorhabditis elegans Hypothetical pr...    35   0.068
Z81050-6|CAB02856.1|  713|Caenorhabditis elegans Hypothetical pr...    31   0.63 
U41021-7|AAL02487.1|  680|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U41021-6|AAL02488.1|  713|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical ...    29   3.4  
AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin...    29   3.4  
AF078790-10|AAC26931.1|  197|Caenorhabditis elegans Hypothetical...    29   4.4  
Z81500-8|CAM84816.1|  284|Caenorhabditis elegans Hypothetical pr...    28   5.9  
U56963-8|AAB38121.1|  155|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AL034393-26|CAI59121.1|  936|Caenorhabditis elegans Hypothetical...    28   7.8  
AL034393-25|CAI59120.1|  797|Caenorhabditis elegans Hypothetical...    28   7.8  
AL034393-24|CAA22312.3|  833|Caenorhabditis elegans Hypothetical...    28   7.8  

>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
 Frame = +1

Query: 70  LLFVACSGIII---KNGEVQ--DWWETSILYQIYPRSFADSDGDGIGDLNGITSKLEYIK 234
           L+F     I++   K  E Q  DWW+T + YQ+   +F DSD DG+GD  GI+ K+++++
Sbjct: 75  LMFAGAIAIVVLSPKCAEKQKPDWWQTKVSYQLLTATFYDSDNDGVGDFAGISQKIDFLR 134

Query: 235 ELGVGAV 255
           ++GV  V
Sbjct: 135 KIGVTTV 141



 Score = 33.1 bits (72), Expect = 0.21
 Identities = 17/79 (21%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +3

Query: 216 KIGIYQRIRCRSCWLSPIFKSPMVDF--GYDIANFYEIHHEYGTMEDFEALLKKANELDI 389
           KI   ++I   + + +P+ K    ++   YD+ +   +   +GT E F+ L+   +   +
Sbjct: 129 KIDFLRKIGVTTVYPTPVIKIHKDEYFNSYDVVDHNSVDERFGTEEQFKELIDTVHNRAM 188

Query: 390 KVVLDLVPNHTSNESVWFQ 446
            +V+DL  +       WF+
Sbjct: 189 YLVMDLPVSTIDLSHPWFE 207


>Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical
           protein C38C6.2 protein.
          Length = 647

 Score = 56.8 bits (131), Expect = 1e-08
 Identities = 19/45 (42%), Positives = 35/45 (77%)
 Frame = +1

Query: 121 DWWETSILYQIYPRSFADSDGDGIGDLNGITSKLEYIKELGVGAV 255
           +WW+T++ Y ++  SF DSDGDG+GD++G+ ++L+ +++ GV  V
Sbjct: 132 NWWQTAVAYHVWVPSFQDSDGDGVGDVDGLINRLDQLRKSGVQTV 176



 Score = 34.3 bits (75), Expect = 0.089
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
 Frame = +2

Query: 512 NGNRQPPNNWLSHFRGSAWEYKEEVGKYYLHQFAVGQPD---LNYRNQDVVDEMKNIIRF 682
           N N      W+S    S + + E    +YLH+   G P    LN++N ++ + M N +  
Sbjct: 248 NANYSQFYTWVSKAADSNF-FTEHKNLFYLHE--KGNPKSAVLNWQNSNLREHMFNALSN 304

Query: 683 WLGKGIAGFQ 712
           W+ +G+ GF+
Sbjct: 305 WIDRGVDGFE 314


>Z35663-6|CAD82917.1|  606|Caenorhabditis elegans Hypothetical
           protein T04A8.7b protein.
          Length = 606

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 19/45 (42%), Positives = 30/45 (66%)
 Frame = +3

Query: 291 FGYDIANFYEIHHEYGTMEDFEALLKKANELDIKVVLDLVPNHTS 425
           FGY ++NF+ +    GT ED + L+ KA+ L I ++LD+V +H S
Sbjct: 155 FGYQVSNFFAVSSRCGTPEDLKYLVDKAHSLGIFMLLDVVHSHAS 199


>Z35663-5|CAA84727.1|  681|Caenorhabditis elegans Hypothetical
           protein T04A8.7a protein.
          Length = 681

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 19/45 (42%), Positives = 30/45 (66%)
 Frame = +3

Query: 291 FGYDIANFYEIHHEYGTMEDFEALLKKANELDIKVVLDLVPNHTS 425
           FGY ++NF+ +    GT ED + L+ KA+ L I ++LD+V +H S
Sbjct: 230 FGYQVSNFFAVSSRCGTPEDLKYLVDKAHSLGIFMLLDVVHSHAS 274


>Z30215-4|CAA82936.1|  541|Caenorhabditis elegans Hypothetical
           protein F40F12.4 protein.
          Length = 541

 Score = 34.7 bits (76), Expect = 0.068
 Identities = 18/48 (37%), Positives = 30/48 (62%)
 Frame = +3

Query: 351 FEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKYYNYFVWE 494
           F+A++K+ N+ +I VV +  P  T N   WF+E+LN +   Y+Y  +E
Sbjct: 466 FQAIVKRENKEEI-VVFE-APKLTRNSRRWFRESLNISAGKYDYIAFE 511


>Z81050-6|CAB02856.1|  713|Caenorhabditis elegans Hypothetical
           protein C50B6.7 protein.
          Length = 713

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 8/35 (22%), Positives = 24/35 (68%)
 Frame = +3

Query: 315 YEIHHEYGTMEDFEALLKKANELDIKVVLDLVPNH 419
           Y++    G  ++F+ ++ + N++ +++++D+V NH
Sbjct: 89  YKLDSRSGNEQEFQDMVNRCNKVGVRIIVDIVMNH 123


>U41021-7|AAL02487.1|  680|Caenorhabditis elegans Hypothetical
           protein F14D12.1a protein.
          Length = 680

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = +3

Query: 339 TMEDFEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKY 473
           ++E F  LLKKANE D  + L L   H   E VW Q   N   K+
Sbjct: 79  SIEMFSRLLKKANEDDGSLNLYLNKKHA--EGVWLQNIGNRTRKH 121


>U41021-6|AAL02488.1|  713|Caenorhabditis elegans Hypothetical
           protein F14D12.1b protein.
          Length = 713

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = +3

Query: 339 TMEDFEALLKKANELDIKVVLDLVPNHTSNESVWFQEALNGNEKY 473
           ++E F  LLKKANE D  + L L   H   E VW Q   N   K+
Sbjct: 79  SIEMFSRLLKKANEDDGSLNLYLNKKHA--EGVWLQNIGNRTRKH 121


>AF000262-9|AAN60529.1|  820|Caenorhabditis elegans Hypothetical
           protein C48E7.8 protein.
          Length = 820

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 415 FGTRSKTTLMSNSFAFFNRASKSSIVPYSWWIS 317
           FGT    T +   FAF +    S+ VP+ W+IS
Sbjct: 458 FGTECNVTTIWPHFAFVSNFFPSTCVPWLWYIS 490


>AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin
           protein 73 protein.
          Length = 577

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 21/90 (23%), Positives = 41/90 (45%)
 Frame = +3

Query: 237 IRCRSCWLSPIFKSPMVDFGYDIANFYEIHHEYGTMEDFEALLKKANELDIKVVLDLVPN 416
           IR    W   + K+  VD      +FY++H ++   ++  A++K   +++++ +    P 
Sbjct: 174 IRAPETWDEYVIKTDKVDGDNLALSFYDVHPDFSVPQN--AMIKINGKVELQALCQYKPA 231

Query: 417 HTSNESVWFQEALNGNEKYYNYFVWEDGII 506
            T  E  +       +E YY     +DGII
Sbjct: 232 ITPAEINYMGRRY--SEIYYPTVPVKDGII 259


>AF078790-10|AAC26931.1|  197|Caenorhabditis elegans Hypothetical
           protein F36H12.5 protein.
          Length = 197

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = -1

Query: 260 KPTAPTPNSLIYSNFEVIPFKSPIPSPSLSAK 165
           K  AP P S I SN +V P  SP P P    K
Sbjct: 32  KAAAPNPISSISSNSKVAPPASPPPPPEAEKK 63


>Z81500-8|CAM84816.1|  284|Caenorhabditis elegans Hypothetical
           protein F11D11.14 protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 420 TSNESVWFQEALNG-NEKYYNYFVWEDG 500
           ++ E  W +EA+NG +  + NY VW DG
Sbjct: 177 SAEECQWIREAVNGMSPPWNNYGVWIDG 204


>U56963-8|AAB38121.1|  155|Caenorhabditis elegans Hypothetical
           protein T13A10.1 protein.
          Length = 155

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = -1

Query: 260 KPTAPTPNSLIYSNFEVIPFKSPIPSPSLSAK 165
           K TAP P S I SN +V P   P P P    K
Sbjct: 32  KATAPKPISSISSNSKVAPPAPPPPPPEAEKK 63


>AL034393-26|CAI59121.1|  936|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7c protein.
          Length = 936

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
 Frame = +3

Query: 303 IANFYEIHHEYGTMEDFEALLKK--ANE-LDIKVVLDLVP----NHTSNESVWFQEALNG 461
           +AN Y  +H+         + +   A E +DI  VL  V      H  N S W       
Sbjct: 178 LANIYSKNHQNSMFNITYPIYRSTYATEPIDISKVLGNVSLDYDGHVENASAWLILYQLK 237

Query: 462 NEKYYNYFVWEDGIIEKMEIG 524
           NEK+     +EDG+ EK++ G
Sbjct: 238 NEKWQLSRDFEDGLAEKIQSG 258


>AL034393-25|CAI59120.1|  797|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7b protein.
          Length = 797

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
 Frame = +3

Query: 303 IANFYEIHHEYGTMEDFEALLKK--ANE-LDIKVVLDLVP----NHTSNESVWFQEALNG 461
           +AN Y  +H+         + +   A E +DI  VL  V      H  N S W       
Sbjct: 162 LANIYSKNHQNSMFNITYPIYRSTYATEPIDISKVLGNVSLDYDGHVENASAWLILYQLK 221

Query: 462 NEKYYNYFVWEDGIIEKMEIG 524
           NEK+     +EDG+ EK++ G
Sbjct: 222 NEKWQLSRDFEDGLAEKIQSG 242


>AL034393-24|CAA22312.3|  833|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7a protein.
          Length = 833

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
 Frame = +3

Query: 303 IANFYEIHHEYGTMEDFEALLKK--ANE-LDIKVVLDLVP----NHTSNESVWFQEALNG 461
           +AN Y  +H+         + +   A E +DI  VL  V      H  N S W       
Sbjct: 178 LANIYSKNHQNSMFNITYPIYRSTYATEPIDISKVLGNVSLDYDGHVENASAWLILYQLK 237

Query: 462 NEKYYNYFVWEDGIIEKMEIG 524
           NEK+     +EDG+ EK++ G
Sbjct: 238 NEKWQLSRDFEDGLAEKIQSG 258


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,653,289
Number of Sequences: 27780
Number of extensions: 404736
Number of successful extensions: 1160
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)