Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0492
         (632 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC071853-1|AAH71853.1|  356|Homo sapiens GREB1 protein protein.        33   1.1  
AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic co...    33   1.1  
AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic co...    33   1.1  
AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coi...    33   1.1  
AF094508-1|AAD16120.1|  788|Homo sapiens dentin phosphoryn protein.    30   7.8  

>BC071853-1|AAH71853.1|  356|Homo sapiens GREB1 protein protein.
          Length = 356

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -1

Query: 185 KCRELKSSALTSVTRPEKLMMSDAPGGLQEPA--*PSRRRGSAALNNSPISLNKFEITMS 12
           KC++L  + L ++ RP  L  S  PG   +PA      R G  A    P+SL + ++   
Sbjct: 275 KCQQLAKNNLLALPRPSALGSSACPGRPGDPALLWAKARGGMGAAGLGPLSLLESDVASM 334

Query: 11  RMR 3
           R+R
Sbjct: 335 RVR 337


>AL135793-9|CAI95134.1| 2948|Homo sapiens transforming, acidic
            coiled-coil containing protein 2 protein.
          Length = 2948

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -2

Query: 472  LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM-MLSARETEAVASATTFSRASPPEAKDL 296
            L+  PTS P  ++W   LT    ++AP    +  L  +  E        SR SPP A  L
Sbjct: 910  LSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAADVL 969

Query: 295  R 293
            +
Sbjct: 970  K 970


>AL135793-7|CAI95132.1| 2675|Homo sapiens transforming, acidic
           coiled-coil containing protein 2 protein.
          Length = 2675

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -2

Query: 472 LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM-MLSARETEAVASATTFSRASPPEAKDL 296
           L+  PTS P  ++W   LT    ++AP    +  L  +  E        SR SPP A  L
Sbjct: 637 LSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAADVL 696

Query: 295 R 293
           +
Sbjct: 697 K 697


>AF528099-1|AAO62630.1| 2948|Homo sapiens transforming acidic coiled
            coil 2, long isoform protein.
          Length = 2948

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -2

Query: 472  LTAGPTSRPKRLIWRLDLTSPIVIAAPMSLTM-MLSARETEAVASATTFSRASPPEAKDL 296
            L+  PTS P  ++W   LT    ++AP    +  L  +  E        SR SPP A  L
Sbjct: 910  LSDTPTSSPTDMVWESSLTEESELSAPTRQKLPALGEKRPEGACGDGQSSRVSPPAADVL 969

Query: 295  R 293
            +
Sbjct: 970  K 970


>AF094508-1|AAD16120.1|  788|Homo sapiens dentin phosphoryn protein.
          Length = 788

 Score = 29.9 bits (64), Expect = 7.8
 Identities = 20/70 (28%), Positives = 35/70 (50%)
 Frame = -1

Query: 461 SNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEGDGSGSLSNDVLKGKSSGSERPQDAAE 282
           S+ +S+  D     + + S  SSD +D+D     D S S S+D     SS S    ++++
Sbjct: 221 SSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSD 280

Query: 281 NADFSFSGTT 252
           ++D S S  +
Sbjct: 281 SSDSSDSSNS 290


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,180,933
Number of Sequences: 237096
Number of extensions: 1599751
Number of successful extensions: 4485
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4485
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)