Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0492
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 31 0.91
AF016670-9|AAB66107.2| 701|Caenorhabditis elegans Hypothetical ... 31 0.91
Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z46937-3|CAA87058.2| 457|Caenorhabditis elegans Hypothetical pr... 29 2.8
U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical pr... 29 2.8
AY305839-1|AAR11984.1| 274|Caenorhabditis elegans nuclear recep... 29 2.8
AF273771-1|AAG15120.1| 454|Caenorhabditis elegans nuclear recep... 29 2.8
AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog... 29 2.8
Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical pr... 28 4.8
AL132949-14|CAB61086.2| 276|Caenorhabditis elegans Hypothetical... 28 6.4
U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical p... 27 8.4
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 30.7 bits (66), Expect = 0.91
Identities = 26/98 (26%), Positives = 42/98 (42%)
Frame = -1
Query: 329 LKGKSSGSERPQDAAENADFSFSGTTDAETLGTARTKLSRVPT*LTRRKCRELKSSALTS 150
L GKS+ + P+ A + T T GTA++ + L+ R S +++
Sbjct: 378 LPGKSTKTLNPKPAGSTRSVTPVSTKPPRTFGTAKSVIVSSKPSLSGYNNRANPSPSMSD 437
Query: 149 VTRPEKLMMSDAPGGLQEPA*PSRRRGSAALNNSPISL 36
+ R K M L E A P +R S+ N PI++
Sbjct: 438 L-RTTKSMAGSTTSLLSERA-PKKRSTSSRRNQEPITI 473
>AF016670-9|AAB66107.2| 701|Caenorhabditis elegans Hypothetical
protein K02F6.9 protein.
Length = 701
Score = 30.7 bits (66), Expect = 0.91
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 441 LFGREVGPAVNNFLEKIPVYLTDTQPRSAVFWSTSPNSSSTDYCKLLERYL 593
+ G E+G A ++F K+ D R +W T NSS+T+Y +L E+ L
Sbjct: 532 VIGHEIGHAFDHFHRKL-----DESGRQQQYWFTETNSSNTEY-ELREKCL 576
>Z73425-5|CAA97787.1| 427|Caenorhabditis elegans Hypothetical
protein F12F6.9 protein.
Length = 427
Score = 29.9 bits (64), Expect = 1.6
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Frame = -1
Query: 344 LSNDVLKGKSSGSERPQDAAENADFS---FSGTTDAETLGTARTKLSRVPT*LTRRKCRE 174
L ++LKGK S S RP A + S S TT +E L + T ++ P +T E
Sbjct: 259 LELELLKGKHSKSVRPSPPASPSSTSQPTTSATTTSEPLSPSTTIVTDAPELVTTETSTE 318
Query: 173 --LKSSALTSVTRPEKLMMSDAPGGLQEPA*PSRRRGSA-ALNNSPISLNKFEI 21
+T+ T E + + G +E P G A P N+ E+
Sbjct: 319 DLAVMEDITATTTMETITFASQDLGKEEIREPENVFGRAPGAETGPQGGNEIEV 372
>Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical
protein F10B5.4 protein.
Length = 426
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 100 WSPPGASDIINFSGRVTDVKADDFSSLHLRRVSYV 204
W+ S ++NF GRVT +F +H Y+
Sbjct: 352 WNDETQSYVLNFHGRVTQASVKNFQIIHQSSPEYI 386
>Z46937-3|CAA87058.2| 457|Caenorhabditis elegans Hypothetical
protein F43C1.4 protein.
Length = 457
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 368 CEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTTDAETLGTARTKLSRVPT 201
C GD + S ++ KS P D+ ADF F + T G + +L R P+
Sbjct: 123 CSGDQTDDNSPLSIEKKSPPGLLPNDSPMMADFKFDPSDIPSTSGGSTQRLERSPS 178
>U67953-4|AAL13329.1| 732|Caenorhabditis elegans Hypothetical
protein ZC13.3 protein.
Length = 732
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 495 VYLTDTQPRSAVFWSTSPNSSSTDYCKLL 581
VY ++PR + W+T+P DYC +L
Sbjct: 520 VYTQTSKPRKST-WTTTPEPKQDDYCDIL 547
>AY305839-1|AAR11984.1| 274|Caenorhabditis elegans nuclear receptor
NHR-20 protein.
Length = 274
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 368 CEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTTDAETLGTARTKLSRVPT 201
C GD + S ++ KS P D+ ADF F + T G + +L R P+
Sbjct: 123 CSGDQTDDNSPLSIEKKSPPGLLPNDSPMMADFKFDPSDIPSTSGGSTQRLERSPS 178
>AF273771-1|AAG15120.1| 454|Caenorhabditis elegans nuclear receptor
NHR-20 protein.
Length = 454
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -1
Query: 368 CEGDGSGSLSNDVLKGKSSGSERPQDAAENADFSFSGTTDAETLGTARTKLSRVPT 201
C GD + S ++ KS P D+ ADF F + T G + +L R P+
Sbjct: 120 CSGDQTDDNSPLSIEKKSPPGLLPNDSPMMADFKFDPSDIPSTSGGSTQRLERSPS 175
>AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog
protein.
Length = 426
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 100 WSPPGASDIINFSGRVTDVKADDFSSLHLRRVSYV 204
W+ S ++NF GRVT +F +H Y+
Sbjct: 352 WNDETQSYVLNFHGRVTQASVKNFQIIHQSSPEYI 386
>Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 503 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEG 360
Q +RD EV+D F EE+D EV D + + D D EG
Sbjct: 28 QAERDGWNEVIDNVGEFEDEEVDEEV--DEEEDHAEDEERDTDDEVEG 73
>Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 503 QVDRDLL*EVVDGWSNFASEEIDLEVRFDIANSYCSSDVTDNDVVCEG 360
Q +RD EV+D F EE+D EV D + + D D EG
Sbjct: 28 QAERDGWNEVIDNVGEFEDEEVDEEV--DEEEDHAEDEERDTDDEVEG 73
>AL132949-14|CAB61086.2| 276|Caenorhabditis elegans Hypothetical
protein Y53F4B.16 protein.
Length = 276
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 483 EKIPVYLTDTQPRSAVFWSTSPNSSSTDYCKL 578
E + V+L +T P S FW+++P C L
Sbjct: 189 EWLDVFLVETMPTSGFFWASTPVEEVVRACVL 220
>U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical
protein ZK1290.10 protein.
Length = 412
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -2
Query: 430 RLDLTSPIVIAAPMSLTMM-LSARETEAVASATTFSRASPPEAK 302
RLD T P+ A P+ L ++ ++ +E + AS T+ A+PP A+
Sbjct: 59 RLDNTIPVPPALPIGLPIIQITTKEPQPPASLTSLP-AAPPSAQ 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,995,933
Number of Sequences: 27780
Number of extensions: 257073
Number of successful extensions: 863
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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