Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0491
         (762 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    39   0.003
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    28   6.3  
Z98877-14|CAD56615.1|  338|Caenorhabditis elegans Hypothetical p...    28   8.3  

>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
 Frame = -3

Query: 751 DSTICASGYNVTSQS---TCQGDSGGGLTXXXXXXXXXXXGISSFVSSTGCHTDYPAGFI 581
           D  ICA+  NV++ S   TC GDSGGGL               +   + GC ++  A F 
Sbjct: 216 DDFICATSMNVSNYSAPRTCHGDSGGGLEYRDDNYGRAFLIAITSFGTRGCPSNMLARFT 275

Query: 580 RPGHYHDWYLEVTGI 536
           R   Y +     TG+
Sbjct: 276 RVDMYLNLICNYTGV 290


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 748 STICASGYNVTSQSTCQGDSGGGL 677
           S +CA GY+     +CQGDSGG L
Sbjct: 223 SMLCA-GYSYGKIDSCQGDSGGPL 245


>Z98877-14|CAD56615.1|  338|Caenorhabditis elegans Hypothetical
           protein Y69H2.14 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
 Frame = +3

Query: 60  DNCKPQSPARRSFSGLPGPLGQ----GE--HADSFSVA 155
           ++C+  +PAR+   G PGP GQ    GE  H+D+ S A
Sbjct: 190 NDCQTCAPARQGAPGPPGPAGQPGQPGEPGHSDTSSTA 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,766,419
Number of Sequences: 27780
Number of extensions: 294154
Number of successful extensions: 854
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)