Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0489
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   2.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.5  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.5  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +3

Query: 720 RYLC**QCWWDFNNSHGESILKY 788
           +Y C  + WW+F   +G + L +
Sbjct: 52  QYTCELKLWWEFCQRNGHNCLDF 74


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 496 TCWKPFSSANSLA 458
           TCW+   SAN +A
Sbjct: 376 TCWQDTKSANKIA 388


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 154 IQGKFDGVKVAVRAGYEKLMNGGSALDSV 240
           I+ K + +  A RAG E++ NG +   SV
Sbjct: 197 IRLKIEDLNGAFRAGLERVQNGENQWISV 225


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,865
Number of Sequences: 336
Number of extensions: 3967
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)