Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0489
         (792 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           29   0.22 
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       23   8.2  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   8.2  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    23   8.2  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 28.7 bits (61), Expect = 0.22
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 655 TSTGGINGKMVGRIGDTPLIGGGTYADDNVGGISTTVTV 771
           +S+GG+    V  +G  PL    +Y DD  GG STTV V
Sbjct: 730 SSSGGLARNGVPGLG--PLARAESYEDDTDGGESTTVVV 766


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 392 LELFN*RNGPRNKILTPHYTSF 327
           LELF   N P  ++ T H T+F
Sbjct: 201 LELFQFINAPTQRVSTMHTTAF 222


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 127  GAGDISESRIQGKFDGVKVAVRAGYEKLMNGGSALDS 237
            G+G       + +FD  K A+ A YE+ ++ G  +D+
Sbjct: 1804 GSGTPEGEWAKDEFDKCKDAIDAQYERSLSSGFFIDN 1840


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 400 IGCWNSLISVTAPEI 356
           IGCWN    VT  E+
Sbjct: 311 IGCWNPAFDVTPAEL 325


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,577
Number of Sequences: 2352
Number of extensions: 16028
Number of successful extensions: 45
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)