Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0489
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical p...    50   1e-06
AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical ...    50   1e-06
U50198-2|AAA91260.2|  363|Caenorhabditis elegans Hypothetical pr...    38   0.008
U00031-1|AAZ82851.1|  330|Caenorhabditis elegans Hypothetical pr...    31   0.94 
U61953-7|AAO91704.1|  330|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z81500-7|CAM84815.1|  230|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z73422-3|CAA97766.1|  523|Caenorhabditis elegans Hypothetical pr...    28   6.7  

>Z92803-13|CAB07249.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
 Frame = +3

Query: 258 MELDENFNAGYGSVLNLNGEVEMEASIMWGQDLISGAVTLIKEFQHPISIARKVLTDT-- 431
           +E  E FN G+GS L ++ EVE EAS M  ++L  GAV  I    HP  +AR +      
Sbjct: 41  LERIEKFNCGFGSHLTIDQEVECEASYMSSKNLSFGAVGAISNVFHPSRVARHLAHSNWW 100

Query: 432 -----PHS-FLGGNGAKLFALEKGFQQVPPES**AKALK 530
                 H   L G GA+ +A++  F    PE   +KA K
Sbjct: 101 KQRRLLHPLILVGRGAEKYAVKNDFPTCTPEELVSKAAK 139


>AL021482-4|CAA16341.2|  331|Caenorhabditis elegans Hypothetical
           protein K01G5.9 protein.
          Length = 331

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
 Frame = +3

Query: 258 MELDENFNAGYGSVLNLNGEVEMEASIMWGQDLISGAVTLIKEFQHPISIARKVLTDT-- 431
           +E  E FN G+GS L ++ EVE EAS M  ++L  GAV  I    HP  +AR +      
Sbjct: 41  LERIEKFNCGFGSHLTIDQEVECEASYMSSKNLSFGAVGAISNVFHPSRVARHLAHSNWW 100

Query: 432 -----PHS-FLGGNGAKLFALEKGFQQVPPES**AKALK 530
                 H   L G GA+ +A++  F    PE   +KA K
Sbjct: 101 KQRRLLHPLILVGRGAEKYAVKNDFPTCTPEELVSKAAK 139


>U50198-2|AAA91260.2|  363|Caenorhabditis elegans Hypothetical
           protein R04B3.2 protein.
          Length = 363

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +1

Query: 628 DADGHIAVATSTGGINGKMVGRIGDTPLIGGGTYADDNVGGISTT 762
           D +   +  TS+ G   K+ GR+GD+P+ G G YA +  GG + T
Sbjct: 219 DTENIFSAGTSSNGARFKIPGRVGDSPIPGAGAYA-NKFGGAAAT 262



 Score = 35.9 bits (79), Expect = 0.033
 Identities = 20/70 (28%), Positives = 34/70 (48%)
 Frame = +3

Query: 285 GYGSVLNLNGEVEMEASIMWGQDLISGAVTLIKEFQHPISIARKVLTDTPHSFLGGNGAK 464
           GYG   + NGE  +++ ++    +  GAV  +   +    +A  V+  T H+ L G  A 
Sbjct: 72  GYGGSPDENGETCLDSLVIDADGMRVGAVANLHRIRDAARVAWGVMNFTKHTLLVGESAT 131

Query: 465 LFALEKGFQQ 494
            FA   GF++
Sbjct: 132 QFAKTLGFKE 141


>U00031-1|AAZ82851.1|  330|Caenorhabditis elegans Hypothetical
           protein B0361.4 protein.
          Length = 330

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +3

Query: 309 NGEVEMEASIMWGQDLISGAVTLIKEFQHPISIARKVLTDTPHSFLGGNGAKLFAL 476
           N    M   ++W  DLIS  + L+++ Q+ +S   + + D  H   G N + L +L
Sbjct: 156 NSVEHMHLYVLWASDLISSPLLLMQQLQN-VSNLMEFIKDVKHCLHGANYSLLCSL 210


>U61953-7|AAO91704.1|  330|Caenorhabditis elegans Hypothetical
           protein R08C7.13 protein.
          Length = 330

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/60 (30%), Positives = 25/60 (41%)
 Frame = -2

Query: 185 ATLTPSNFP*IRLSEISPAPPCTMIIGFIAPLSMTKANKTHIEMNMICFNIVLESNARIH 6
           A  T  N P   L+ +    P T +IGF      TK     + + M   N+ L+   RIH
Sbjct: 2   AVFTLLNLPEKSLNYVLRRMPLTELIGFALISKTTKDQAERLNVKMRSLNVSLDGAIRIH 61


>Z81500-7|CAM84815.1|  230|Caenorhabditis elegans Hypothetical
           protein F11D11.11 protein.
          Length = 230

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 204 FVASPDCDFNSIKLSLNTTLRNITSPSMHDD 112
           ++ +    FNS++ S  TTL N T P+ H D
Sbjct: 29  YITTVQLYFNSVEKSRKTTLPNATCPASHKD 59


>Z73422-3|CAA97766.1|  523|Caenorhabditis elegans Hypothetical
           protein B0564.4 protein.
          Length = 523

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +2

Query: 455 RS*AVRTRKRFPTSTTRVLISESAKEALNDFLNKGDDQRTEIGRK 589
           R  ++RTR+RFPT  T V     +K+ L+ + +      + +G+K
Sbjct: 141 RDVSMRTRRRFPTMETVVAAGFMSKDELDLYNSYTTKNNSRLGKK 185


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,311,572
Number of Sequences: 27780
Number of extensions: 368045
Number of successful extensions: 950
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)