Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0488
         (802 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11505-2|CAA77585.1|  418|Caenorhabditis elegans Hypothetical pr...    42   5e-04
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr...    29   3.9  

>Z11505-2|CAA77585.1|  418|Caenorhabditis elegans Hypothetical
           protein F59B2.3 protein.
          Length = 418

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 21/55 (38%), Positives = 37/55 (67%)
 Frame = +3

Query: 12  ALEAASLHPAKALGIDDKKGNLNFDSDADFVILHPKTLKVQSTWIAGECVYKCQN 176
           AL++A+  PA  LG+ D+KG L+    ADFV++  K + V++T+ +G+ V+  Q+
Sbjct: 365 ALQSATHKPATLLGVSDEKGTLDVGRLADFVLI-DKNVTVKATFCSGKRVFLAQD 418


>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical
           protein B0365.7 protein.
          Length = 2769

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 355 NFFKCSIVDSRWLKCLTNYEA 417
           N+++C +++  WL CL  Y +
Sbjct: 539 NYYECEMIEKEWLDCLKKYRS 559


>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical
           protein B0365.7 protein.
          Length = 2769

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +1

Query: 355 NFFKCSIVDSRWLKCLTNYEA 417
           N+++C +++  WL CL  Y +
Sbjct: 539 NYYECEMIEKEWLDCLKKYRS 559


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,479,569
Number of Sequences: 27780
Number of extensions: 327476
Number of successful extensions: 597
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 597
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)