Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0484
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   4.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   5.3  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.1  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   7.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.1  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.3  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 220 DRHETHERRAQQKTSNTKH 276
           D+H+ HER  +    N  H
Sbjct: 87  DKHDRHERHFESSFGNNLH 105


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 360 IRNSVLLSFGNSIVLLLAIVVY*SAIH 280
           I  S+L SFG ++   L I+     IH
Sbjct: 363 ISRSLLTSFGGALTTFLVILFQYGGIH 389


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 214 EKDRHETHERRAQQKTSNTKH 276
           E++RH+  ++  QQK     H
Sbjct: 81  EQERHKQQQQEKQQKIEQQTH 101


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 356 RIPEECSGGCSSQRSMEHP 412
           R+P +C+G   +  S  HP
Sbjct: 336 RMPHKCNGNAHNCPSRSHP 354


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 356 RIPEECSGGCSSQRSMEHP 412
           R+P +C+G   +  S  HP
Sbjct: 343 RMPHKCNGNAHNCPSRSHP 361


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 214 EKDRHETHERRAQQKTSNTKH 276
           E++RH+  ++  QQK     H
Sbjct: 232 EQERHKQQQQEKQQKIEQQTH 252


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 214 EKDRHETHERRAQQKTSNTKH 276
           E++RH+  ++  QQK     H
Sbjct: 291 EQERHKQQQQEKQQKIEQQTH 311


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 466  RSLCEWAK*KFCVSKK 419
            R +C+W K   C  KK
Sbjct: 1141 RKICDWPKSAKCEEKK 1156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,208
Number of Sequences: 336
Number of extensions: 3495
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)