Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0483
         (567 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3LS51 Cluster: Predicted protein; n=1; Pichia stipitis...    35   1.5  
UniRef50_A0UJN9 Cluster: Putative uncharacterized protein precur...    34   2.7  
UniRef50_Q89Q99 Cluster: ABC transporter permease protein; n=33;...    33   6.2  
UniRef50_Q88F38 Cluster: Cation-transporting P-type ATPase; n=21...    32   8.1  
UniRef50_A4J310 Cluster: Putative uncharacterized protein precur...    32   8.1  

>UniRef50_A3LS51 Cluster: Predicted protein; n=1; Pichia
           stipitis|Rep: Predicted protein - Pichia stipitis
           (Yeast)
          Length = 562

 Score = 34.7 bits (76), Expect = 1.5
 Identities = 23/74 (31%), Positives = 33/74 (44%)
 Frame = -1

Query: 405 FVYLHVNVQNMHFSVPKFVR*SEILFAARXRTEDSRK*SRRRLRCGGPXRMCRSSDADSP 226
           F   H NV++  FS+PK  R S I +  R ++      S   +R GG     + S   SP
Sbjct: 421 FTSRHHNVESSRFSIPKLERNSSISYTPRLQSPSFFNRSPSPIRSGGHTPSLQRS--PSP 478

Query: 225 DASTGRRREPHVDN 184
             S    R P ++N
Sbjct: 479 VRSPSLNRRPSINN 492


>UniRef50_A0UJN9 Cluster: Putative uncharacterized protein precursor;
            n=1; Burkholderia multivorans ATCC 17616|Rep: Putative
            uncharacterized protein precursor - Burkholderia
            multivorans ATCC 17616
          Length = 1690

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = -1

Query: 321  RXRTEDSRK*SRRRLRCGGPXRMCRSSDADSPDASTGRRREP 196
            R    D R+ +RR  R   P R    SD D  DA+ GRRR P
Sbjct: 1474 RSADPDPRRAARRLHRARDPVRELHPSDHDPVDAAVGRRRRP 1515


>UniRef50_Q89Q99 Cluster: ABC transporter permease protein; n=33;
           Bacteria|Rep: ABC transporter permease protein -
           Bradyrhizobium japonicum
          Length = 297

 Score = 32.7 bits (71), Expect = 6.2
 Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = -2

Query: 227 LTRLPAGAVNLTLTTRELIVAARLTTKLRKSLSLEVILP-ILKALALSVDLGSATSLVDT 51
           LTRL  G+ N  +  RE ++AAR + K +  +++E +LP IL  L +   +  A +++  
Sbjct: 171 LTRLTRGSAN-AIWAREFVLAARASGKGKFRITIEHVLPNILSILIVQATIQFALAILAE 229

Query: 50  ATIA 39
           A ++
Sbjct: 230 AALS 233


>UniRef50_Q88F38 Cluster: Cation-transporting P-type ATPase; n=21;
           Pseudomonadaceae|Rep: Cation-transporting P-type ATPase
           - Pseudomonas putida (strain KT2440)
          Length = 882

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = -2

Query: 116 LPILKALALSVDLGSATSLVDTATIAVNTNNRANFILQ 3
           +P+L A  +S+ +GSAT L  T+  AV  +NR   ++Q
Sbjct: 759 VPVLAAADISIAMGSATDLAKTSADAVLLSNRLQALVQ 796


>UniRef50_A4J310 Cluster: Putative uncharacterized protein
           precursor; n=1; Desulfotomaculum reducens MI-1|Rep:
           Putative uncharacterized protein precursor -
           Desulfotomaculum reducens MI-1
          Length = 118

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
 Frame = +1

Query: 7   KMKFALLFVLTAIVAVSTNEVADPRSTDRANAL-SIGSITSSDRLLRSFV 153
           K K  +LF + AI+A++T   ADP + D    L ++ + T +D++L+ F+
Sbjct: 6   KDKILILFSIMAILALATPCFADPANPDITTGLGNVDAKTLADKILKIFI 55


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,734,412
Number of Sequences: 1657284
Number of extensions: 7535702
Number of successful extensions: 20372
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20363
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)