Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0483
         (567 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001814-1|AAN71569.1|  534|Drosophila melanogaster RH35990p pro...    29   3.3  
AY058608-1|AAL13837.1|  545|Drosophila melanogaster LD30155p pro...    29   3.3  
AE014297-82|AAN13312.1|  338|Drosophila melanogaster CG14648-PB,...    29   3.3  
AE014297-81|AAF52130.1|  545|Drosophila melanogaster CG14648-PA,...    29   3.3  
AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p pro...    29   5.8  
AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-P...    29   5.8  

>BT001814-1|AAN71569.1|  534|Drosophila melanogaster RH35990p
           protein.
          Length = 534

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 288 RRRLRCGGPXRMCRSSDADSPDASTGRRREPHVDNPRVN 172
           RRR++ G P R    +D + P   T ++R P      VN
Sbjct: 290 RRRIQRGNPGRTTSQTDNEQPQGETAQKRTPRRKGRFVN 328


>AY058608-1|AAL13837.1|  545|Drosophila melanogaster LD30155p
           protein.
          Length = 545

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 288 RRRLRCGGPXRMCRSSDADSPDASTGRRREPHVDNPRVN 172
           RRR++ G P R    +D + P   T ++R P      VN
Sbjct: 301 RRRIQRGNPGRTTSQTDNEQPQGETAQKRTPRRKGRFVN 339


>AE014297-82|AAN13312.1|  338|Drosophila melanogaster CG14648-PB,
           isoform B protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 288 RRRLRCGGPXRMCRSSDADSPDASTGRRREPHVDNPRVN 172
           RRR++ G P R    +D + P   T ++R P      VN
Sbjct: 94  RRRIQRGNPGRTTSQTDNEQPQGETAQKRTPRRKGRFVN 132


>AE014297-81|AAF52130.1|  545|Drosophila melanogaster CG14648-PA,
           isoform A protein.
          Length = 545

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 288 RRRLRCGGPXRMCRSSDADSPDASTGRRREPHVDNPRVN 172
           RRR++ G P R    +D + P   T ++R P      VN
Sbjct: 301 RRRIQRGNPGRTTSQTDNEQPQGETAQKRTPRRKGRFVN 339


>AY069555-1|AAL39700.1|  639|Drosophila melanogaster LD28458p
           protein.
          Length = 639

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = -2

Query: 248 DPRTRTALTRLPAGAVNLTLTTRELIVAARLTTKLRKSLSLEVILPILKALALSV 84
           D + R       A  ++  L    L + A+LTT+LRK L+ EV   + K LA  V
Sbjct: 132 DEKWREDFKEEQAAEMHKRLVKSRLELRAKLTTELRKELAEEVRSEVRKELAEEV 186


>AE014297-3277|AAF56101.2|  639|Drosophila melanogaster CG31365-PA
           protein.
          Length = 639

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = -2

Query: 248 DPRTRTALTRLPAGAVNLTLTTRELIVAARLTTKLRKSLSLEVILPILKALALSV 84
           D + R       A  ++  L    L + A+LTT+LRK L+ EV   + K LA  V
Sbjct: 132 DEKWREDFKEEQAAEMHKRLVKSRLELRAKLTTELRKELAEEVRSEVRKELAEEV 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,061,302
Number of Sequences: 53049
Number of extensions: 346671
Number of successful extensions: 932
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)