Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0481
         (715 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_26408| Best HMM Match : Lipase (HMM E-Value=0)                      76   3e-14
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)            60   1e-09
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)                  54   9e-08
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)              54   1e-07
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)                  29   2.8  
SB_2178| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.8  
SB_39182| Best HMM Match : Cellulase (HMM E-Value=0.00018)             29   3.7  
SB_6059| Best HMM Match : 7tm_2 (HMM E-Value=6.5e-09)                  28   8.6  
SB_13455| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.6  

>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
          Length = 714

 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 7/149 (4%)
 Frame = +3

Query: 273 VKDAFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLK----LPLNKVHI 440
           +K+  L  GD+NVI+VDW   +   ++ AV     VG+  A  L+ L+      L  VH+
Sbjct: 134 MKNELLWEGDFNVIIVDWMRGAWFPFTRAVANTRLVGAQTARLLQILEERSGRKLAYVHV 193

Query: 441 VGFNLGAHVAGVTGRNLEGKXXXXXXXXXXXXIGKTTYYDWEQTMLNTL-KLFTPTDLVS 617
           +GF+ GAHVAG  GR ++ +                 +   E   L+T   LF   D++ 
Sbjct: 194 IGFSFGAHVAGYVGRRMKKRGRMIDRITALDPAAMWFHKHHEDVRLDTSDALF--VDVIH 251

Query: 618 TKTAWAL--AIGHIDFFVNGRLVQPGCTN 698
           T   + +   IGH DF+ NG   QPGC N
Sbjct: 252 TSADYGITSTIGHADFYPNGGKKQPGCDN 280


>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
          Length = 291

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
 Frame = +3

Query: 273 VKDAFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKN-LKLPLNK----VH 437
           +KD  L   D NVI+VDW   +   Y  AV     VG+ +A F+K  L L  ++     H
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAVANTRLVGAQVAAFMKTILSLSGSREGGAFH 174

Query: 438 IVGFNLGAHVAGVTGRNLEGKXXXXXXXXXXXXIGKTTYYDWEQTMLNTLKLFTP-TDLV 614
            +GF+LGAH++G  G+ L  K               T  +  E   +   +L     D++
Sbjct: 175 SIGFSLGAHISGYVGQRL--KRIGRHLDRITGLDPATLMFKGEAPDVRLDRLDAQFVDVI 232

Query: 615 STKTAWALAI--GHIDFFVNGRLVQPGCT 695
            T   + +    GH+DF+ NG   Q GC+
Sbjct: 233 HTSYVFGITAPHGHMDFYPNGGTSQRGCS 261


>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
          Length = 131

 Score = 54.4 bits (125), Expect = 9e-08
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
 Frame = +3

Query: 270 IVKDAFLTSGDYNVIVVDWSSFS--LSTYSTAVMAVTGVGSSIATFLKNLK----LPLNK 431
           +++D  L     NVI VDW S +  L+ Y  A      VG+ +A  +  ++      L +
Sbjct: 43  VMRDELLKREPMNVITVDWQSGADGLNLYHVAAGNTRVVGAQLAELITTIQRVFDFDLRR 102

Query: 432 VHIVGFNLGAHVAGVTGRNLEGK 500
           VH++G +LGAHVAG  G  L GK
Sbjct: 103 VHLIGHSLGAHVAGYAGERLSGK 125


>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 940

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 10/154 (6%)
 Frame = +3

Query: 273  VKDAFLTSGDYNVIVVDWSSFSLSTYSTAVMAVTGVGSSIATFLKNLKLPLNKV----HI 440
            ++ A +   D NVI  DWS  +   Y  A      VG+ I   +K L           ++
Sbjct: 632  IRHALIKQEDANVITTDWSRGATIPYEQATANTRMVGAQITELIKFLNNQTGNTPASFYL 691

Query: 441  VGFNLGAHVAGVTGRNL--EGKXXXXXXXXXXXXIG-KTTYYD--WEQTMLNTLK-LFTP 602
            VGF+LGAH++G  GR +   G+            I     + D   + +  + +  + T 
Sbjct: 692  VGFSLGAHISGYVGRRIAKTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTD 751

Query: 603  TDLVSTKTAWALAIGHIDFFVNGRLVQPGCTNNL 704
             DL  T T      GHIDF+ NG   QPGC + L
Sbjct: 752  MDLAGTPT----VSGHIDFYPNGGKKQPGCRDLL 781



 Score = 37.1 bits (82), Expect = 0.014
 Identities = 19/42 (45%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
 Frame = +2

Query: 485 KFGRQSSKITGLDPSARDWEN-NV-LRLGTNDAQYVEVIHTD 604
           K G++ ++ITGLDP++  + N +V +RL  +DA +V+V+HTD
Sbjct: 710 KTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFVDVMHTD 751


>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
          Length = 408

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 645 GHIDFFVNGRLVQPGC 692
           GHIDF+ NG   QPGC
Sbjct: 43  GHIDFYPNGGKNQPGC 58


>SB_2178| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 53

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 273 VKDAFLTSGDYNVIVVDWSSFSLSTYSTAV 362
           +K+  L  GD+NVI+VDW   +   ++ AV
Sbjct: 19  MKNELLWEGDFNVIIVDWMRGAWFPFTRAV 48


>SB_39182| Best HMM Match : Cellulase (HMM E-Value=0.00018)
          Length = 949

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 557 RLGTNDAQYVEVIHTDGSGVNKNGLGVGYWT 649
           R+  NDA  +   HT  SG NK   G  YWT
Sbjct: 554 RIYENDAFMMAEWHTYASGPNKESGGAKYWT 584



 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 557 RLGTNDAQYVEVIHTDGSGVNKNGLGVGYWT 649
           R+  NDA  +   HT  SG NK   G  YWT
Sbjct: 860 RIYENDAFMMAEWHTYASGPNKESGGAKYWT 890


>SB_6059| Best HMM Match : 7tm_2 (HMM E-Value=6.5e-09)
          Length = 1069

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = -1

Query: 688 PGWTRRPLTKKSMCPIANAQAVFVDTRSVGVNNFNVLSIVCSQS*YVVFPIT 533
           P W   PL      P+  + A F    + G N+ ++ SI C ++  V  P+T
Sbjct: 498 PSWESSPLCGPQEIPVGGSTASFSIIFNFGTNDRSISSIRCEEN-LVYNPLT 548


>SB_13455| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1387

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +3

Query: 99  WKFK*ILLL*QCTEKFDYTHR 161
           +K+  I LL  C+EKFDY HR
Sbjct: 435 FKWDHIYLLDSCSEKFDYFHR 455


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,145,860
Number of Sequences: 59808
Number of extensions: 508148
Number of successful extensions: 1168
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)