Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0433
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   4.9  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   6.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.5  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 256 QPVTAITAVEYVDRLNDDQSTT 191
           QPVT +T + Y    N D S T
Sbjct: 351 QPVTNLTNLTYPSYYNQDVSCT 372


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -3

Query: 264 LDPNLSQPSLPLNMLID 214
           L+P ++Q  LPLN+ +D
Sbjct: 198 LNPPVTQTQLPLNLGLD 214


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -1

Query: 98   DNIPIIVKGRSRIVSSGKVVFGECNWVSLL 9
            + I +++K    ++ SG ++F E  W+  L
Sbjct: 1148 ERIKLVIKAIIIMILSGCIIFTEGIWICSL 1177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,556
Number of Sequences: 336
Number of extensions: 2990
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)