Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0433
(632 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 62 4e-10
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41) 50 2e-06
SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064) 48 5e-06
SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07) 36 0.027
SB_20514| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_34654| Best HMM Match : zf-C2H2 (HMM E-Value=8e-31) 29 4.1
SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043) 29 4.1
SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42) 28 5.5
SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 62.1 bits (144), Expect = 4e-10
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
Frame = +2
Query: 308 VHIVGFNLGAHVAGVTGRNLEGK---VARITGLDPSARDW---ENNVLRLGTNDAQLR*S 469
VH++GF+ GAHVAG GR ++ + + RIT LDP+A W + +RL T+DA L
Sbjct: 191 VHVIGFSFGAHVAGYVGRRMKKRGRMIDRITALDPAAM-WFHKHHEDVRLDTSDA-LFVD 248
Query: 470 YSHRRIWCQQKRLGIAIGHIDFFVNGRLVQPGCTN--------NLCSHNRAYEVFAATI 622
H + IGH DF+ NG QPGC N C H RA +F ++
Sbjct: 249 VIHT---SADYGITSTIGHADFYPNGGKKQPGCDNFFRGFSSYLFCGHKRAPALFTTSL 304
Score = 34.3 bits (75), Expect = 0.083
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 8/63 (12%)
Frame = +3
Query: 75 FNNNWDIVVIIHGHSG-TATTTINPIV-------KDAFLRSGNYNVIVVDWSSFSLSTYS 230
FN + V+IIHG +G T T+I V K+ L G++NVI+VDW + ++
Sbjct: 101 FNASRRTVIIIHGFAGFTTLTSIRHEVNWWGFPMKNELLWEGDFNVIIVDWMRGAWFPFT 160
Query: 231 TAV 239
AV
Sbjct: 161 RAV 163
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 60.1 bits (139), Expect = 1e-09
Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Frame = +2
Query: 311 HIVGFNLGAHVAGVTGRNLE---GKVARITGLDPSARDWEN-NV-LRLGTNDAQLR*SYS 475
++VGF+LGAH++G GR + K+ RITGLDP++ + N +V +RL +DA
Sbjct: 690 YLVGFSLGAHISGYVGRRIAKTGQKLNRITGLDPASIHFVNAHVDVRLDPSDADFV-DVM 748
Query: 476 HRRIWCQQKRLGIAIGHIDFFVNGRLVQPGCTNNL--------CSHNRAYEVFAATIT 625
H + GHIDF+ NG QPGC + L C H RA E +A ++T
Sbjct: 749 HTDM--DLAGTPTVSGHIDFYPNGGKKQPGCRDLLDGPINYVICDHMRAPEYYAESVT 804
>SB_43441| Best HMM Match : Lipase (HMM E-Value=8.19998e-41)
Length = 291
Score = 49.6 bits (113), Expect = 2e-06
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Frame = +2
Query: 254 LGSSIATFLKN-LKLPLNK----VHIVGFNLGAHVAGVTGRNLE--GK-VARITGLDPSA 409
+G+ +A F+K L L ++ H +GF+LGAH++G G+ L+ G+ + RITGLDP+
Sbjct: 150 VGAQVAAFMKTILSLSGSREGGAFHSIGFSLGAHISGYVGQRLKRIGRHLDRITGLDPAT 209
Query: 410 RDWENNV--LRLGTNDAQLR*SYSHRRIWCQQKRLGIAIGHIDFFVNGRLVQPGCT 571
++ +RL DAQ ++ + GH+DF+ NG Q GC+
Sbjct: 210 LMFKGEAPDVRLDRLDAQFVDVIHTSYVF----GITAPHGHMDFYPNGGTSQRGCS 261
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 150 VKDAFLRSGNYNVIVVDWSSFSLSTYSTAV 239
+KD LR + NVI+VDW + Y AV
Sbjct: 115 MKDELLRKSDDNVIIVDWIRGAKIPYVRAV 144
>SB_7713| Best HMM Match : Lipase (HMM E-Value=0.0064)
Length = 131
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/47 (46%), Positives = 28/47 (59%)
Frame = +2
Query: 251 RLGSSIATFLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARIT 391
+L I T + L +VH++G +LGAHVAG G L GKV RIT
Sbjct: 84 QLAELITTIQRVFDFDLRRVHLIGHSLGAHVAGYAGERLSGKVGRIT 130
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 75 FNNNWDIVVIIHGHSGTATTTINPIVKDAFLRSGNYNVIVVDWSS 209
F + +V+IIHG + + +++D L+ NVI VDW S
Sbjct: 19 FRGDRKLVLIIHGFMQSGNVSWIRVMRDELLKREPMNVITVDWQS 63
>SB_43904| Best HMM Match : Lipase (HMM E-Value=5e-07)
Length = 408
Score = 35.9 bits (79), Expect = 0.027
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +2
Query: 521 GHIDFFVNGRLVQPGC-------TNNL-CSHNRAYEVFAATIT 625
GHIDF+ NG QPGC +N L C H RA++ F +IT
Sbjct: 43 GHIDFYPNGGKNQPGCRDIADGPSNALKCDHVRAHDYFTESIT 85
>SB_20514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 250
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 188 YRCG-LVIIQSINIFNGSDGCDRLGSSIATFLKNLKLPLNKVHIVGFNLGAHVAGVTGRN 364
Y+ G L+ IQ+I F G D L +++ N+K+P + + F G GRN
Sbjct: 80 YKDGKLLAIQNIKKFLGEDSIQELIDFCLSYMSNIKIPKKRGTFIEFRHGLINVSPIGRN 139
>SB_5209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +2
Query: 314 IVGFNLGAHVAGVTG---RNLEG-KVARITG 394
++GF+LG HVAG G +N G K+ RI+G
Sbjct: 21 VIGFSLGGHVAGYAGSRIKNTTGLKLGRISG 51
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/46 (26%), Positives = 26/46 (56%)
Frame = +3
Query: 66 AAPFNNNWDIVVIIHGHSGTATTTINPIVKDAFLRSGNYNVIVVDW 203
A+ ++ VI HG++ + +T+ ++ A L+ + NV++ DW
Sbjct: 95 ASTYDGKKRTFVIAHGYTESGSTSWVGHMRQALLQKDDVNVVITDW 140
>SB_58542| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +2
Query: 266 IATFLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPS 406
+ +FL + + K H+ G ++G H+ GV +VA + + P+
Sbjct: 120 LLSFLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPA 166
>SB_34654| Best HMM Match : zf-C2H2 (HMM E-Value=8e-31)
Length = 624
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 42 HFPTGNDPAAPFNNNWDIVVIIHGHSGTATTTIN 143
HF G++PA ++NN D+ + H + T IN
Sbjct: 569 HFKCGDNPAGIYDNNNDLETPVPPHRESKTARIN 602
>SB_22961| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.043)
Length = 183
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 275 FLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPS 406
FL + + K H+ G ++G H+ GV +VA + + P+
Sbjct: 1 FLHAVGVNKRKFHLAGISMGGHIVGVYAAQHPARVASVIMMCPA 44
>SB_38976| Best HMM Match : BACK (HMM E-Value=3.09967e-42)
Length = 603
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +2
Query: 230 NGSDGCDRLGSSIATFLKNLKLPLNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPSA 409
+G C G+++ T + + P +V V FN ++ G T +L V + +P+A
Sbjct: 373 SGRVQCYNPGNNVWTTVASCLTPRCQVGAVAFNSHLYIIGGTTEHLSQPVNLVERYNPAA 432
Query: 410 RDW 418
W
Sbjct: 433 DSW 435
>SB_27171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 524 HIDFFVNGRLVQPGCTNNLCSHNRA 598
H+D VNG VQ C+HN+A
Sbjct: 24 HLDKDVNGAYVQGSFIGGFCTHNKA 48
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,617,793
Number of Sequences: 59808
Number of extensions: 392602
Number of successful extensions: 1261
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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