Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0433
         (632 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40936-1|AAL65777.2|  770|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z71178-5|CAA94879.1| 1161|Caenorhabditis elegans Hypothetical pr...    28   6.4  
AL132847-2|CAB63372.1|  343|Caenorhabditis elegans Hypothetical ...    28   6.4  
U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase prot...    27   8.4  
AF099925-11|AAO38625.1|   80|Caenorhabditis elegans Fatty acid/r...    27   8.4  

>U40936-1|AAL65777.2|  770|Caenorhabditis elegans Hypothetical
           protein C13E3.1 protein.
          Length = 770

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
 Frame = +2

Query: 206 IIQSINIFNGSDGCDRLGSSIATFLKNLKLP--LNKVHIVGFNLGAHVAGVTGRNLEGKV 379
           I Q   IF G D  ++  + +++F +   +P  L  VH+ G NL   +  +        +
Sbjct: 540 IEQQHEIFFGLDKTNK-NNHLSSFWRTECMPIVLGLVHMAGHNLVDQIDSMNQTESSEIL 598

Query: 380 ARITGLDPSARDWENNVLRLG 442
             + GL P  + W   V R G
Sbjct: 599 HSMPGLSPQTKTWLKQVTRYG 619


>Z71178-5|CAA94879.1| 1161|Caenorhabditis elegans Hypothetical protein
            B0024.6 protein.
          Length = 1161

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
 Frame = +2

Query: 197  GLVIIQSINIFNGSDGCDRLGSSIATFLKNLK------LPLNKVHI-VGFNLGAHVAGVT 355
            G  +   +   NG++    + S    F+K+L       LP  K+ I VGF+ G+ VAGV 
Sbjct: 1001 GYFVASGVPRRNGNEHTRNIASMSINFVKSLADFSIPHLPGEKIKIRVGFHCGSVVAGVV 1060

Query: 356  G 358
            G
Sbjct: 1061 G 1061


>AL132847-2|CAB63372.1|  343|Caenorhabditis elegans Hypothetical
           protein Y48G10A.3 protein.
          Length = 343

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = +2

Query: 191 RCGLVIIQSINIF-NGSDGCDRLGSSIATFLKNLKLPLNKVHIVGFNLGAHVAGVTGR-- 361
           RC   I++   +F       + L   I ++++   LP+++    G  L   V  + G   
Sbjct: 202 RCSPDIVRQYRVFFQHLPNPNSLAEFIESYIQRTPLPISRDGTTGVQLKVPVLQLVGAGS 261

Query: 362 -NLEGKVARITGLDPSARDW 418
            ++E  V   T LDP+  DW
Sbjct: 262 AHVEDTVEVNTKLDPAHADW 281


>U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase protein
           4 protein.
          Length = 751

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 8/36 (22%)
 Frame = +2

Query: 65  CCAL*Q*LGYCRNNTR--------SQWHCYDDDQPY 148
           CCA+   +G CR NTR        S  HCY +D  Y
Sbjct: 574 CCAVWGLMGECRKNTRYMACNCRVSCGHCYPEDYNY 609


>AF099925-11|AAO38625.1|   80|Caenorhabditis elegans Fatty
           acid/retinol binding proteinprotein 7, isoform b
           protein.
          Length = 80

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 365 LEGKVARITGLDPSARDWENNVLRLGTNDAQLR 463
           LEG   R+ GL P+A ++   V  L  N A +R
Sbjct: 20  LEGNKKRLDGLSPAAVEYAKKVRSLAENAATMR 52


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,410,694
Number of Sequences: 27780
Number of extensions: 291904
Number of successful extensions: 658
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)