Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0432
(678 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50386| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-09) 112 2e-25
SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 100 9e-22
SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018) 97 1e-20
SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0) 77 2e-14
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_50050| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.092
SB_43410| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-26) 33 0.16
SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 32 0.37
SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34) 31 0.65
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 30 2.0
SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0) 30 2.0
SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_2439| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_3739| Best HMM Match : Pkinase (HMM E-Value=0) 29 3.5
SB_29733| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5) 28 6.0
SB_21189| Best HMM Match : PCI (HMM E-Value=8.2) 28 6.0
SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_37907| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_22769| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-07) 28 8.0
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 28 8.0
SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05) 28 8.0
SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46) 28 8.0
SB_25339| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_50386| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-09)
Length = 123
Score = 112 bits (270), Expect = 2e-25
Identities = 50/83 (60%), Positives = 64/83 (77%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
D+ L +F+T +T++DAPGH+DFI NMITG +QAD A+L+V A TGEFEAG GQT
Sbjct: 2 DVGLTRFQTKNKVITLMDAPGHKDFIPNMITGAAQADVAILVVDAITGEFEAGFESGGQT 61
Query: 435 REHALLAFTLGVKQLIVGVNKMD 503
REHA+L +LGV QLIV +NK+D
Sbjct: 62 REHAILVRSLGVTQLIVAINKLD 84
>SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43)
Length = 547
Score = 100 bits (240), Expect = 9e-22
Identities = 43/77 (55%), Positives = 58/77 (75%)
Frame = +3
Query: 273 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 452
F+T + T++DAPGH+ F+ NMI+G +QAD VL+++A GEFE G + GQTREHA+L
Sbjct: 217 FDTDTKHFTLLDAPGHKSFVPNMISGATQADLGVLVISARKGEFETGFERGGQTREHAML 276
Query: 453 AFTLGVKQLIVGVNKMD 503
A T GVK L++ VNKMD
Sbjct: 277 AKTAGVKHLVILVNKMD 293
Score = 47.6 bits (108), Expect = 9e-06
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +1
Query: 121 YKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITM 255
Y G +DKRT+EK+E+EA+E + ++ +W LD + ER++G T+
Sbjct: 166 YLTGQVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGNTV 210
Score = 33.9 bits (74), Expect = 0.12
Identities = 11/24 (45%), Positives = 21/24 (87%)
Frame = +2
Query: 518 YSEPRFEEIKKEVSSYIKKIGYNP 589
++E R+EEIK +++ ++KK+G+NP
Sbjct: 299 WNEERYEEIKVKLTPFLKKVGFNP 322
>SB_18076| Best HMM Match : GTP_EFTU (HMM E-Value=0.018)
Length = 106
Score = 97.1 bits (231), Expect = 1e-20
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +1
Query: 37 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 183
M KEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKE+ E+
Sbjct: 1 MPKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKESSEV 49
>SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0)
Length = 322
Score = 76.6 bits (180), Expect = 2e-14
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 359
DIALWKFET KYYVT+IDAPGHRDFIKNMITGTSQ
Sbjct: 26 DIALWKFETLKYYVTVIDAPGHRDFIKNMITGTSQ 60
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +1
Query: 181 MGKGSFKYAWVLDKLKAERERGITM 255
MGKGSFKYAWVLDKLKAERERGIT+
Sbjct: 1 MGKGSFKYAWVLDKLKAERERGITI 25
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 35.5 bits (78), Expect = 0.040
Identities = 25/65 (38%), Positives = 31/65 (47%)
Frame = +1
Query: 61 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 240
N ++ HVD GKST L+ G I K + K VLDKL+ ERE
Sbjct: 1943 NFSIVAHVDHGKSTLADRLLEVTGTISKSSDNK----------------QVLDKLQVERE 1986
Query: 241 RGITM 255
RGIT+
Sbjct: 1987 RGITV 1991
>SB_50050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 34.3 bits (75), Expect = 0.092
Identities = 24/70 (34%), Positives = 34/70 (48%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 473
+T ID PGH F G + D VL+VAA G ++ ++ HA+ A
Sbjct: 78 ITFIDTPGHAAFNSMRARGANVTDIVVLVVAADDGV----KTQTVESIRHAMHAKV---- 129
Query: 474 QLIVGVNKMD 503
LIV +NK+D
Sbjct: 130 PLIVAINKID 139
>SB_43410| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-26)
Length = 541
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 303 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 482
+D PGH + M+ G + D A+L++A QT EH + +K ++
Sbjct: 69 VDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMKLKHIL 122
Query: 483 VGVNKMD 503
+ NK+D
Sbjct: 123 ILQNKID 129
>SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 833
Score = 32.3 bits (70), Expect = 0.37
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 37 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 132
M K+ N+ VI HVD GKST T L+ K G
Sbjct: 12 MDKKLNIRNMSVIAHVDHGKSTLTDSLVSKAG 43
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 288 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 398
+ + +ID+PGH DF + D A+++V +G
Sbjct: 99 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 135
>SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34)
Length = 240
Score = 31.5 bits (68), Expect = 0.65
Identities = 22/85 (25%), Positives = 33/85 (38%)
Frame = +3
Query: 258 IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTR 437
I + + + +D PGH F G D +++VAA QT+
Sbjct: 128 IGAYSVKVGDQKIAFLDTPGHEAFTAMRARGAQVTDLVIIVVAADDDVMP-------QTK 180
Query: 438 EHALLAFTLGVKQLIVGVNKMDSTN 512
E A GV +I +NK+D N
Sbjct: 181 EAISHAQAAGV-PIIFAINKIDKPN 204
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 300 IIDAPGHRDFIKNMITGTSQADCAVLIV 383
IID PGH F G+S D A+L+V
Sbjct: 682 IIDTPGHESFSNLRSRGSSLCDMAILVV 709
>SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0)
Length = 359
Score = 29.9 bits (64), Expect = 2.0
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 398
+ I+D PGH+DF ++ + D ++++ G
Sbjct: 81 INILDTPGHKDFAEDTFRTLTAVDSVIVVIDVAKG 115
>SB_56013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 52 THINIVVIGHVDSGKSTTTGHLIY 123
T I + V+G+V+SGKST G L Y
Sbjct: 111 TDIRMAVLGNVESGKSTLLGVLTY 134
>SB_41020| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1229
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = -1
Query: 276 RTSREQYHCDTTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 106
RT+ TT+T S YPS+ + +F D T N TT V +T+
Sbjct: 226 RTTSTSAVFPTTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSITA 282
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 276 RTSREQYHCDTTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 106
RT+ TT+T S YPS+ + +F D T N TT V +++
Sbjct: 427 RTTSTSAVFPTTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSISA 483
>SB_2439| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 458 HPRCQTAHRRSKQNGFHEPPYSEPRFEEIKKEVSSYIKKIGYN 586
H + + RR ++N + + P+FE++K + +S KKI N
Sbjct: 109 HETTEPSVRRCQRNSVRDIDAAWPKFEKLKSQFNSNSKKISMN 151
>SB_3739| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 490
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 449 ARFHPRCQTAHRRSKQNGFHEPPYSEPRFEEIKK 550
A F PR + +R ++N H PYS+ EE +K
Sbjct: 118 ADFAPRARQPNREHRENERHNRPYSQGYHEEERK 151
>SB_29733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 360
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 468 VKQLIVGVNKMDSTNHHTVSPDLRKSRRKY--PHTSRRLATTQLLSLSCPFLDGTETTCW 641
V Q+ G+N + S T+SP+ R RK P+ R++ T+L ++ P+L T W
Sbjct: 229 VHQMSRGLNAIHSKYMATLSPECRDVLRKLLEPNPQLRISLTEL--MAHPWL--TSKGTW 284
Query: 642 SLQP 653
L+P
Sbjct: 285 PLEP 288
>SB_19088| Best HMM Match : PSGP (HMM E-Value=2.5)
Length = 737
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 276 RTSREQYHCDTTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 106
RT+ TT+T S YPS+ + +F D T N TT V +++
Sbjct: 337 RTTSTTADFPTTITPSPNITSYPSLMTSAVGNFTSAKSVVFDSTTPNATTLVPSISA 393
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 276 RTSREQYHCDTTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 106
RT+ TT+T S YPS+ + +F D T N TT V +++
Sbjct: 538 RTTSTSAVFPTTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVQSISA 594
>SB_21189| Best HMM Match : PCI (HMM E-Value=8.2)
Length = 125
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +2
Query: 428 SNP*ACLARFHPRC-----QTAHRRSKQNGFHEPPYSEPRFEEIKKEVSSYIKKIGYN 586
+N A L RF C ++A RR ++N + + P+F+ +K + S KKI N
Sbjct: 25 NNEFAALKRFLKNCMHETTESAVRRCQRNSVMDIDAAWPKFQRLKSQFSINSKKISMN 82
>SB_43213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 676 PSLEPRHFG*RLQHVVSVPSRNGHESDSSWVVANLLD 566
P+LEP + G L + S S GH+ D+ ++ LL+
Sbjct: 378 PNLEPSYIGKMLATIESTLSAKGHQEDAEEFLSCLLN 414
>SB_37907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 458 HPRCQTAHRRSKQNGFHEPPYSEPRFEEIKKEVSSYIKKIGYN 586
H ++A RR ++N + + P+F+ +K + S KKI N
Sbjct: 8 HETTESAVRRCQRNSVMDIDAAWPKFQRLKSQFSINSKKISMN 50
>SB_22769| Best HMM Match : GTP_EFTU (HMM E-Value=3.9e-07)
Length = 203
Score = 27.9 bits (59), Expect = 8.0
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Frame = +1
Query: 34 KMGKEKTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYA 207
K+ + + NI V+GHVDSGK++ L DK + ++G SF+ A
Sbjct: 28 KIKERILNFNIGVLGHVDSGKTSLAKALSTTASTASFDKNPQSQERGITLDLGFSSFQVA 87
Query: 208 WVLDKLKAERERGI---TMILLSGSSKLASTMLPSLMLL 315
A E + T++ G + L T++ ++
Sbjct: 88 LPEHLRSAGSEHDLLQMTLVDCPGHASLIKTIIGGAQII 126
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/52 (25%), Positives = 22/52 (42%)
Frame = +3
Query: 417 SKNGQTREHALLAFTLGVKQLIVGVNKMDSTNHHTVSPDLRKSRRKYPHTSR 572
+K T+ H + +T + K +T HT+ P K PHT++
Sbjct: 19 TKTHTTKPHNIKLYTTKPRTTKPHTTKPHTTKPHTIKPHTTKPHTTKPHTTK 70
>SB_10056| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=7.7e-05)
Length = 1960
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 276 RTSREQYHCDTTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 106
RT+ TT+T S YPS+ + +F D T N TT V +++
Sbjct: 226 RTTSTSAVFPTTITPSPNITSYPSLMTSAVGNFTSAKSVVFDSTTPNATTLVPSISA 282
>SB_34931| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.46)
Length = 572
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 276 RTSREQYHCDTTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 106
RT+ TT+T S YPS+ + +F D T N TT V +++
Sbjct: 8 RTTSTSAVFPTTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSISA 64
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -1
Query: 276 RTSREQYHCDTTLTLSL*FVQYPSIFEGSFTHFXXXXXXXLDGTFVNTTTFVDQVTS 106
RT+ TT+T S YPS+ + +F D T N TT V +++
Sbjct: 410 RTTSTSAVFPTTITPSPNITSYPSLMTSAVGNFTSATSVVFDSTTPNATTLVPSISA 466
>SB_25339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1049
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +3
Query: 345 TGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTNHHTV 524
TGT+ D + + G+F++ ++ N + LLA +G+ + G+ + + HT
Sbjct: 790 TGTNVLDSIISLTPGKIGQFDSSVTMNEDSTSE-LLASIMGLTKTTSGLLVSQTVSTHTT 848
Query: 525 S 527
+
Sbjct: 849 A 849
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,674,744
Number of Sequences: 59808
Number of extensions: 451727
Number of successful extensions: 1377
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1374
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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