Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0432
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 167 8e-42
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 167 8e-42
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 166 1e-41
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 154 5e-38
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 113 8e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 113 8e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 4e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 4e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 66 2e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 66 2e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 66 2e-11
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 42 4e-04
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 38 0.007
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 35 0.046
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 35 0.061
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 34 0.11
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.14
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.25
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.25
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.76
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 31 0.76
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.76
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 30 1.3
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 30 1.3
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.3
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.3
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.3
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.3
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.3
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 7.0
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 27 9.3
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 27 9.3
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 167 bits (405), Expect = 8e-42
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQT
Sbjct: 74 DIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQT 133
Query: 435 REHALLAFTLGVKQLIVGVNKMDST 509
REHALLA TLGVKQLIV NKMDST
Sbjct: 134 REHALLAQTLGVKQLIVACNKMDST 158
Score = 154 bits (374), Expect = 5e-38
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = +1
Query: 37 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 216
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 217 DKLKAERERGITM 255
DKLKAERERGIT+
Sbjct: 61 DKLKAERERGITI 73
Score = 97.9 bits (233), Expect = 6e-21
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = +2
Query: 509 EPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGW 676
EPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW
Sbjct: 159 EPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGW 214
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 167 bits (405), Expect = 8e-42
Identities = 78/85 (91%), Positives = 81/85 (95%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQT
Sbjct: 74 DIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQT 133
Query: 435 REHALLAFTLGVKQLIVGVNKMDST 509
REHALLA TLGVKQLIV NKMDST
Sbjct: 134 REHALLAQTLGVKQLIVACNKMDST 158
Score = 154 bits (374), Expect = 5e-38
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = +1
Query: 37 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 216
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 217 DKLKAERERGITM 255
DKLKAERERGIT+
Sbjct: 61 DKLKAERERGITI 73
Score = 97.9 bits (233), Expect = 6e-21
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = +2
Query: 509 EPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGW 676
EPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW
Sbjct: 159 EPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGW 214
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 166 bits (404), Expect = 1e-41
Identities = 93/141 (65%), Positives = 98/141 (69%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQT
Sbjct: 74 DIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQT 133
Query: 435 REHALLAFTLGVKQLIVGVNKMDSTNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPF 614
REHALLA TLGVKQL+ S T SPD +SRR T Q L
Sbjct: 134 REHALLAQTLGVKQLV-------SLRSPTRSPD----------SSRRSDTIQRLFHLSQS 176
Query: 615 LDGTETTCWSLQPKCLGSRDG 677
D TETTC C GSRDG
Sbjct: 177 PDSTETTCLRSPRTCHGSRDG 197
Score = 154 bits (374), Expect = 5e-38
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = +1
Query: 37 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 216
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 217 DKLKAERERGITM 255
DKLKAERERGIT+
Sbjct: 61 DKLKAERERGITI 73
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 154 bits (374), Expect = 5e-38
Identities = 71/73 (97%), Positives = 72/73 (98%)
Frame = +1
Query: 37 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 216
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 217 DKLKAERERGITM 255
DKLKAERERGIT+
Sbjct: 61 DKLKAERERGITI 73
Score = 97.9 bits (233), Expect = 6e-21
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = +2
Query: 509 EPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGW 676
EPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW
Sbjct: 125 EPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGW 180
Score = 94.7 bits (225), Expect(2) = 5e-20
Identities = 41/44 (93%), Positives = 44/44 (100%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 386
DIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 74 DIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 20.6 bits (41), Expect(2) = 5e-20
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3
Query: 477 LIVGVNKMDST 509
L+V NKMDST
Sbjct: 114 LVVACNKMDST 124
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +1
Query: 37 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 216
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 217 DKLKAER 237
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 113 bits (273), Expect = 8e-26
Identities = 53/86 (61%), Positives = 64/86 (74%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT
Sbjct: 237 DIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQT 296
Query: 435 REHALLAFTLGVKQLIVGVNKMDSTN 512
+EHALL +LGV QLIV VNK+D+ +
Sbjct: 297 KEHALLLRSLGVTQLIVAVNKLDTVD 322
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/70 (57%), Positives = 53/70 (75%)
Frame = +1
Query: 46 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 225
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 226 KAERERGITM 255
+ ERERG+TM
Sbjct: 227 EEERERGVTM 236
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/53 (32%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 673
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 323 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWYDG 372
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 113 bits (273), Expect = 8e-26
Identities = 53/86 (61%), Positives = 64/86 (74%)
Frame = +3
Query: 255 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 434
DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT
Sbjct: 255 DIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQT 314
Query: 435 REHALLAFTLGVKQLIVGVNKMDSTN 512
+EHALL +LGV QLIV VNK+D+ +
Sbjct: 315 KEHALLLRSLGVTQLIVAVNKLDTVD 340
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/70 (57%), Positives = 53/70 (75%)
Frame = +1
Query: 46 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 225
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 226 KAERERGITM 255
+ ERERG+TM
Sbjct: 245 EEERERGVTM 254
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/53 (32%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Frame = +2
Query: 518 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 673
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ G
Sbjct: 341 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK-RMELDWYDG 390
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 103 bits (247), Expect = 1e-22
Identities = 45/77 (58%), Positives = 58/77 (75%)
Frame = +3
Query: 273 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALL 452
FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L
Sbjct: 182 FETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSML 241
Query: 453 AFTLGVKQLIVGVNKMD 503
T GVK L++ VNKMD
Sbjct: 242 VKTAGVKHLVILVNKMD 258
Score = 83.4 bits (197), Expect = 1e-16
Identities = 36/72 (50%), Positives = 52/72 (72%)
Frame = +1
Query: 40 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 219
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 220 KLKAERERGITM 255
ERE+G T+
Sbjct: 164 TNDEEREKGKTV 175
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +2
Query: 518 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPST--KMPWFKG 673
+ E RF+EI+ +++ +++K+G+NP + +VP SG G + + T + W+ G
Sbjct: 264 WEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSEGNWYSG 318
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 68.5 bits (160), Expect = 4e-12
Identities = 35/66 (53%), Positives = 43/66 (65%)
Frame = +3
Query: 306 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 485
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 486 GVNKMD 503
+NK D
Sbjct: 167 FINKAD 172
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 49 KTHINIVVIGHVDSGKSTTT 108
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 68.5 bits (160), Expect = 4e-12
Identities = 35/66 (53%), Positives = 43/66 (65%)
Frame = +3
Query: 306 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 485
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 486 GVNKMD 503
+NK D
Sbjct: 167 FINKAD 172
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 49 KTHINIVVIGHVDSGKSTTT 108
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +3
Query: 270 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 449
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 106 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 158
Query: 450 LAFTLGV--KQLIVGVNKMD 503
LA +GV ++V +NK+D
Sbjct: 159 LARQVGVPLDNIVVFMNKVD 178
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 43 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 213
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 214 LDKLKAER 237
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +3
Query: 270 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 449
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 450 LAFTLGV--KQLIVGVNKMD 503
LA +GV ++V +NK+D
Sbjct: 160 LARQVGVPLDNIVVFMNKVD 179
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 43 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 213
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 214 LDKLKAER 237
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Frame = +3
Query: 270 KFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHAL 449
++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G QTREH L
Sbjct: 107 EYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLL 159
Query: 450 LAFTLGV--KQLIVGVNKMD 503
LA +GV ++V +NK+D
Sbjct: 160 LARQVGVPLDNIVVFMNKVD 179
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 43 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 213
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 214 LDKLKAER 237
L+ A+R
Sbjct: 106 LEYETAKR 113
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/86 (30%), Positives = 44/86 (51%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 473
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 474 QLIVGVNKMDSTNHHTVSPDLRKSRR 551
++I+ +NK D +S +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 58 INIVVIGHVDSGKSTTT 108
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/73 (39%), Positives = 34/73 (46%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 473
VT +D PGH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 474 QLIVGVNKMDSTN 512
QL+V VNK+D N
Sbjct: 258 QLVVAVNKIDKPN 270
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/65 (43%), Positives = 34/65 (52%)
Frame = +1
Query: 61 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 240
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 241 RGITM 255
RGIT+
Sbjct: 74 RGITV 78
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 35.1 bits (77), Expect = 0.046
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +1
Query: 61 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 240
NI + H+DSGK+T T ++Y G ID + +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 241 RGITM 255
RGIT+
Sbjct: 96 RGITI 100
Score = 29.1 bits (62), Expect = 3.0
Identities = 29/92 (31%), Positives = 37/92 (40%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 473
+ IID PGH DF + D AVL++ G G G+ T L + +
Sbjct: 114 INIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQSQTFTVNRQLARYNV--- 165
Query: 474 QLIVGVNKMDSTNHHTVSPDLRKSRRKYPHTS 569
I VNKMD N T L R K H +
Sbjct: 166 PFICFVNKMD-RNGATPLKALDGLRNKLNHNA 196
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 34.7 bits (76), Expect = 0.061
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 288 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 467
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 468 VKQLIVGVNKMD 503
+ Q+I +NK+D
Sbjct: 155 I-QIIPVINKID 165
Score = 34.3 bits (75), Expect = 0.081
Identities = 35/123 (28%), Positives = 56/123 (45%)
Frame = +1
Query: 61 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 240
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 241 RGITMILLSGSSKLASTMLPSLMLLDTEISSRT*SQEPLRLIALCSS*LPVPVNSKLVSL 420
RGIT+ + + + + L L+DT S E R +A+C L + ++ V
Sbjct: 86 RGITVKAQTAALRHRGYL---LNLIDTP-GHVDFSAEVSRSLAVCDGILLLVAANQGVQA 141
Query: 421 RTV 429
+T+
Sbjct: 142 QTI 144
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +3
Query: 291 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 470
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 471 KQLIVGVNKMD 503
L++ NK+D
Sbjct: 182 NHLMILQNKVD 192
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 496 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 368
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 37 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 132
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 288 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 398
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 37 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 132
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 288 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 398
+ + +ID+PGH DF + D A+++V +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 13 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 123
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 31.1 bits (67), Expect = 0.76
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +3
Query: 300 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 479
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 480 IVGVNKMDSTNHHTVSP 530
++ +NK+D + +P
Sbjct: 605 VIALNKIDRLYEYESNP 621
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 13 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 123
++IRD P K+ + V+G+VD+GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 279 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 398
+ Y + IID PGH +F M AD V++V A G
Sbjct: 198 SKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 279 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 398
+ Y + IID PGH +F M AD V++V A G
Sbjct: 73 SKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 139 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 240
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 139 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 240
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 558 PHTSRRLATTQLLSLSCPFLD 620
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 558 PHTSRRLATTQLLSLSCPFLD 620
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 558 PHTSRRLATTQLLSLSCPFLD 620
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 558 PHTSRRLATTQLLSLSCPFLD 620
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 58 INIVVIGHVDSGKSTTT 108
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z54269-1|CAA91022.2| 815|Caenorhabditis elegans Hypothetical
protein F02C12.1 protein.
Length = 815
Score = 28.7 bits (61), Expect = 4.0
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = -2
Query: 500 HFVYSYDELFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHS----AISLRGSCDHVL 333
H + DELFD ++ G + + +T F F + HS I LR S ++
Sbjct: 257 HIIKLRDELFDINRRQKK-QKEGESNIVETKFVFVSFFADGSHSNILPLICLRISDTKIM 315
Query: 332 DEISVSRSINDGNIVLASFELPESNII 252
S R+ +D L +LPE NI+
Sbjct: 316 YVESTGRAYDDWEDFLNKNKLPECNIL 342
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 294 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 389
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 27.9 bits (59), Expect = 7.0
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +3
Query: 462 LGVKQLIVGVNK---MDSTNHHT--VSPDLRKSRRKYPHTSRRLATTQLLSLSCPFLDG 623
+G+K VGV + +D TN S ++R + P T +++ QLL PF+DG
Sbjct: 1822 IGLKNAPVGVEQQFSVDYTNSGASIASVEVRHGDQTIPITVKKMKPGQLLCTFTPFVDG 1880
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 383
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 294 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 383
+ +ID+PGH DF + + +D A+L++
Sbjct: 85 INLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 27.5 bits (58), Expect = 9.3
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = -2
Query: 479 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 321
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 320 VSRSINDGNI 291
S S +D I
Sbjct: 84 FSGSKSDAEI 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,050,539
Number of Sequences: 27780
Number of extensions: 341201
Number of successful extensions: 1139
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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