Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0430
         (698 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal  pro...   100   2e-21
AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p pro...   100   2e-21
AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA...   100   2e-21
BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p pro...    75   1e-13
BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p pro...    75   1e-13
BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p pro...    75   1e-13
AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p pro...    75   1e-13
AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA...    75   1e-13
BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p pro...    47   3e-05

>X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal
           protein protein.
          Length = 239

 Score =  100 bits (239), Expect = 2e-21
 Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
 Frame = +1

Query: 508 SWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIICVEDLIHEIFTVGE 684
           +WGYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I CVEDL+HEIFTVG 
Sbjct: 131 TWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGP 190

Query: 685 KFKY 696
            FKY
Sbjct: 191 NFKY 194



 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 398 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYILGDTP 523
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI    P
Sbjct: 94  KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYP 135



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = +3

Query: 258 YVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 401
           Y  EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 47  YQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 94


>AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p
           protein.
          Length = 252

 Score =  100 bits (239), Expect = 2e-21
 Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
 Frame = +1

Query: 508 SWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIICVEDLIHEIFTVGE 684
           +WGYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I CVEDL+HEIFTVG 
Sbjct: 144 TWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGP 203

Query: 685 KFKY 696
            FKY
Sbjct: 204 NFKY 207



 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 398 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYILGDTP 523
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI    P
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYP 148



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = +3

Query: 258 YVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 401
           Y  EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 60  YQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 107



 Score = 32.3 bits (70), Expect = 0.65
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = +1

Query: 91  PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAD 255
           PV  K  +KKLPAVPES LK             +  LK+ +    +K+E   RA+
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAE 58


>AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA
           protein.
          Length = 252

 Score =  100 bits (239), Expect = 2e-21
 Identities = 43/64 (67%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
 Frame = +1

Query: 508 SWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIICVEDLIHEIFTVGE 684
           +WGYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I CVEDL+HEIFTVG 
Sbjct: 144 TWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFTVGP 203

Query: 685 KFKY 696
            FKY
Sbjct: 204 NFKY 207



 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 398 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYILGDTP 523
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEPYI    P
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYP 148



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = +3

Query: 258 YVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 401
           Y  EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 60  YQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 107



 Score = 32.3 bits (70), Expect = 0.65
 Identities = 20/55 (36%), Positives = 27/55 (49%)
 Frame = +1

Query: 91  PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAD 255
           PV  K  +KKLPAVPES LK             +  LK+ +    +K+E   RA+
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAE 58


>BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p
           protein.
          Length = 257

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 31/60 (51%), Positives = 47/60 (78%)
 Frame = +1

Query: 511 WGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKF 690
           +G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG  F
Sbjct: 150 YGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNF 209


>BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p
           protein.
          Length = 257

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 31/60 (51%), Positives = 47/60 (78%)
 Frame = +1

Query: 511 WGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKF 690
           +G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG  F
Sbjct: 150 YGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNF 209


>BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p
           protein.
          Length = 257

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 31/60 (51%), Positives = 47/60 (78%)
 Frame = +1

Query: 511 WGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKF 690
           +G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG  F
Sbjct: 150 YGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNF 209


>AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p
           protein.
          Length = 257

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 31/60 (51%), Positives = 47/60 (78%)
 Frame = +1

Query: 511 WGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKF 690
           +G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG  F
Sbjct: 150 YGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNF 209


>AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA
           protein.
          Length = 257

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 31/60 (51%), Positives = 47/60 (78%)
 Frame = +1

Query: 511 WGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVGEKF 690
           +G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI TVG  F
Sbjct: 150 YGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICTVGPNF 209


>BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p
           protein.
          Length = 227

 Score = 46.8 bits (106), Expect = 3e-05
 Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = -2

Query: 535 HSLSWGI-PKNVRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 395
           H L  GI P +V LGD  H+   L+Q  +HT+V L Q++QLQN  D G
Sbjct: 44  HGLQIGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91



 Score = 34.3 bits (75), Expect = 0.16
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 392 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFLDVLSA 249
           +LVDT D+DDK QFG  G+V +  +   +   D   F LD + L +L A
Sbjct: 93  HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLLGA 141



 Score = 30.7 bits (66), Expect = 2.0
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -3

Query: 663 MDEVLNTDNVVFMEPL-LNNAVGSDWYTLSTQLGESTFVY*LTDTL*VGVSP 511
           MD++L+  N+V +  L L++ V  D + L+  L EST V  L   L +G++P
Sbjct: 1   MDKILDALNLVRLTQLPLDHEVIGDGHALAVMLHESTLVDQLPHGLQIGIAP 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,783,344
Number of Sequences: 53049
Number of extensions: 584322
Number of successful extensions: 1360
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)