Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0428
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   2.6  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   6.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   7.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.9  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.9  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 37  LQNEIANCPRTHWSGGRRI 93
           LQNE A C   H  G R++
Sbjct: 67  LQNECAKCNEKHKEGVRKV 85


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 37  LQNEIANCPRTHWSGGRRI 93
           LQNE A C   H  G R++
Sbjct: 68  LQNECAKCNEKHKEGVRKV 86


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 75  ERRPPHQSNPSKSRISQYRNTKASTLECTSSP 170
           ++ PPHQ  P + + +Q +    +T     SP
Sbjct: 200 QQGPPHQQPPIQQQPNQGQQPPGNTAAALPSP 231


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 75  ERRPPHQSNPSKSRISQYRNTKASTLECTSSP 170
           ++ PPHQ  P + + +Q +    +T     SP
Sbjct: 202 QQGPPHQQPPIQQQPNQGQQPPGNTAAALPSP 233


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 34  NLQNEIANCPRTHWSGGRRINQTRPNRGYPNTEIRKHR 147
           +L +  ANCP +     + ++  RP+ G    ++RK R
Sbjct: 88  HLGSYAANCPPSPKDDEKCLSLERPSGGGKGKKMRKPR 125


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -2

Query: 312 SFDIFYEVYRINREIDVVN 256
           S DI Y+V  +++ +D++N
Sbjct: 185 SVDISYDVPALSKYLDIIN 203


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
          monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 44 FCKFYCYKTNK 12
          F  FYCYKT K
Sbjct: 17 FYLFYCYKTIK 27


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
          monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 44 FCKFYCYKTNK 12
          F  FYCYKT K
Sbjct: 17 FYLFYCYKTIK 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,993
Number of Sequences: 336
Number of extensions: 3218
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)