Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0428
         (748 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   0.47 
AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.         27   0.81 
AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.         27   0.81 
AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.         27   0.81 
AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.         27   0.81 
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    27   0.81 
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    27   0.81 
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    26   1.1  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    26   1.1  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    26   1.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   1.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   2.5  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   2.5  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   5.7  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   7.6  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = -1

Query: 523  GATCKRRPQLEHRRCLRS*QNQPGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFLRSLQ 344
            G   + +PQ  HR   +  Q Q   ++ Q + ++  +  Q+QP   + QL     L +  
Sbjct: 1286 GLASEMQPQQLHRSQQQQQQQQQQQQQQQQQQQQQQQQQQHQPPSTQAQLRPSAPLNT-- 1343

Query: 343  SQPGNRHSQLE 311
            S P + HS L+
Sbjct: 1344 SPPNSWHSHLK 1354


>AY341191-1|AAR13755.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 306 DIFYEVYRINREIDVVNGISMSKIATLSTFS 214
           D FY   R+     +VN +  ++I T+S+F+
Sbjct: 124 DAFYGCVRVGNRQHIVNPVKSARIRTISSFN 154


>AY341190-1|AAR13754.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 306 DIFYEVYRINREIDVVNGISMSKIATLSTFS 214
           D FY   R+     +VN +  ++I T+S+F+
Sbjct: 124 DAFYGCVRVGNRQHIVNPVKSARIRTISSFN 154


>AY341189-1|AAR13753.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 306 DIFYEVYRINREIDVVNGISMSKIATLSTFS 214
           D FY   R+     +VN +  ++I T+S+F+
Sbjct: 124 DAFYGCVRVGNRQHIVNPVKSARIRTISSFN 154


>AY341188-1|AAR13752.1|  191|Anopheles gambiae GNBP B1 protein.
          Length = 191

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 306 DIFYEVYRINREIDVVNGISMSKIATLSTFS 214
           D FY   R+     +VN +  ++I T+S+F+
Sbjct: 124 DAFYGCVRVGNRQHIVNPVKSARIRTISSFN 154


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 306 DIFYEVYRINREIDVVNGISMSKIATLSTFS 214
           D FY   R+     +VN +  ++I T+S+F+
Sbjct: 142 DAFYGCVRVGNRQHIVNPVKSARIRTISSFN 172


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.6 bits (56), Expect = 0.81
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -2

Query: 306 DIFYEVYRINREIDVVNGISMSKIATLSTFS 214
           D FY   R+     +VN +  ++I T+S+F+
Sbjct: 142 DAFYGCVRVGNRQHIVNPVKSARIRTISSFN 172


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -2

Query: 546 LVHPRCSQGRLVNGVLNWSIDVVYEADRISRDIGVLNWSIDVVYE 412
           LV  R   GR+   VL    D+  EAD+I +D+  L   ID +YE
Sbjct: 277 LVASRAWPGRVDASVLK---DLNREADQIKQDVADLERWIDRIYE 318


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 647 NKSVSIFVQFSR-IFNPADRANFTVIL 570
           +KS+S  +Q  + +F P D  NF VIL
Sbjct: 118 SKSISGLIQVDKPVFKPGDTVNFRVIL 144


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = -2

Query: 546 LVHPRCSQGRLVNGVLNWSIDVVYEADRISRDIGVLNWSIDVVYE 412
           LV  R   GR+   VL    D+  EAD+I +D+  L   ID +YE
Sbjct: 277 LVASRAWPGRVDASVLK---DLNREADQIKQDVADLERWIDRIYE 318


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = -1

Query: 457  PGHRRPQLEHRRCLRSLQNQPGHRRPQLEHRGFLRSLQSQPGNRHSQLELRH 302
            P H+  Q++ +   + LQ      + QL+ +   +  Q Q   +H Q +L+H
Sbjct: 1281 PTHQHSQIQLQPIQQPLQTLQHQYQQQLQQQQQQQQQQQQQHQQHQQHQLQH 1332


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 706 STSWAFSKSSGCASIGRS-TITSPFPSSSNSA 614
           S +W+ S  SG  SIG   T T+  P SS S+
Sbjct: 489 SGNWSASSESGRTSIGSEITTTNTHPKSSASS 520


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -1

Query: 706 STSWAFSKSSGCASIGRS-TITSPFPSSSNSA 614
           S +W+ S  SG  SIG   T T+  P SS S+
Sbjct: 490 SGNWSASSESGRTSIGSEITTTNTHPKSSASS 521


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -1

Query: 388 RRPQLEHRGFLRSLQSQPGNRHSQL 314
           RRP+ ++ GFL ++Q +  + HSQ+
Sbjct: 115 RRPEEDYEGFLAAVQLE-ASTHSQV 138


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 508 VYKSPL*TSWMNQLKRRMRKSRM 576
           +++SP    W N+  R ++K RM
Sbjct: 326 IFRSPPNPPWSNRTLRNLKKDRM 348


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,356
Number of Sequences: 2352
Number of extensions: 14491
Number of successful extensions: 56
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)