Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0425
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79759-7|CAE18047.1| 239|Caenorhabditis elegans Hypothetical pr... 28 3.3
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 28 3.3
Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical p... 27 5.7
Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical p... 27 5.7
Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical p... 27 5.7
Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical pr... 27 5.7
U41038-3|AAK29708.3| 623|Caenorhabditis elegans Cadherin family... 27 5.7
AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase... 27 5.7
U40936-1|AAL65777.2| 770|Caenorhabditis elegans Hypothetical pr... 27 7.6
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 7.6
AF099925-10|AAC69504.1| 138|Caenorhabditis elegans Fatty acid/r... 27 7.6
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 27 10.0
U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (... 27 10.0
U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical pr... 27 10.0
>Z79759-7|CAE18047.1| 239|Caenorhabditis elegans Hypothetical
protein ZK858.8 protein.
Length = 239
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = -2
Query: 330 NVSNSNAQAVFVDTRSVGVNNFNVLTSFVPSRSTLFSQSRAEGSRPVILAT 178
N+ + Q + S +NFN F+P+ ++ S RAE ILAT
Sbjct: 119 NILENIEQQTHQFSHSTSDHNFNGGDIFIPNEESIRSTLRAENQAETILAT 169
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 41 MAVTGVGSSIATFLKNLKLPLNKVHIVGFNLGAHVAG 151
+ +T S + TF LK+P VHI+G + G G
Sbjct: 10 LPMTAGASDVRTFFTGLKIPDGAVHIIGGDEGEVFVG 46
>Z68108-19|CAD44153.1| 1895|Caenorhabditis elegans Hypothetical
protein F31B12.1c protein.
Length = 1895
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 179 VARITGLDPSARDWENNVLRLGTNDVNT 262
V R G DPS+R W ++++ GT+ +T
Sbjct: 1659 VLRKKGSDPSSRAWITSIIKSGTSGSST 1686
>Z68108-18|CAB60299.4| 1868|Caenorhabditis elegans Hypothetical
protein F31B12.1b protein.
Length = 1868
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 179 VARITGLDPSARDWENNVLRLGTNDVNT 262
V R G DPS+R W ++++ GT+ +T
Sbjct: 1659 VLRKKGSDPSSRAWITSIIKSGTSGSST 1686
>Z68108-17|CAB60298.3| 1898|Caenorhabditis elegans Hypothetical
protein F31B12.1a protein.
Length = 1898
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 179 VARITGLDPSARDWENNVLRLGTNDVNT 262
V R G DPS+R W ++++ GT+ +T
Sbjct: 1659 VLRKKGSDPSSRAWITSIIKSGTSGSST 1686
>Z50740-6|CAD44124.1| 1895|Caenorhabditis elegans Hypothetical protein
F31B12.1c protein.
Length = 1895
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 179 VARITGLDPSARDWENNVLRLGTNDVNT 262
V R G DPS+R W ++++ GT+ +T
Sbjct: 1659 VLRKKGSDPSSRAWITSIIKSGTSGSST 1686
>Z50740-5|CAB60282.4| 1868|Caenorhabditis elegans Hypothetical protein
F31B12.1b protein.
Length = 1868
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 179 VARITGLDPSARDWENNVLRLGTNDVNT 262
V R G DPS+R W ++++ GT+ +T
Sbjct: 1659 VLRKKGSDPSSRAWITSIIKSGTSGSST 1686
>Z50740-4|CAB60281.3| 1898|Caenorhabditis elegans Hypothetical protein
F31B12.1a protein.
Length = 1898
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 179 VARITGLDPSARDWENNVLRLGTNDVNT 262
V R G DPS+R W ++++ GT+ +T
Sbjct: 1659 VLRKKGSDPSSRAWITSIIKSGTSGSST 1686
>U41038-3|AAK29708.3| 623|Caenorhabditis elegans Cadherin family
protein 9 protein.
Length = 623
Score = 27.5 bits (58), Expect = 5.7
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 11 FSLSTYSTAVMAVTGVGSSIATFLKNLK--LPLNKVHIVGFNLGAHVAGVTGR-NLEGKV 181
F +TYST + T +GS++ T + N + PL + N + V+G L K+
Sbjct: 334 FQHNTYSTTISPTTPIGSTVITVVANSENNTPLTYSLLADTNT-VSIDEVSGNVVLRKKL 392
Query: 182 ARITGLDPSARDWENNV 232
+ L+ +A D EN V
Sbjct: 393 EKPETLNVTASDGENVV 409
>AF044576-1|AAC38963.1| 1898|Caenorhabditis elegans phospholipase C
PLC210 protein.
Length = 1898
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 179 VARITGLDPSARDWENNVLRLGTNDVNT 262
V R G DPS+R W ++++ GT+ +T
Sbjct: 1659 VLRKKGSDPSSRAWITSIIKSGTSGSST 1686
>U40936-1|AAL65777.2| 770|Caenorhabditis elegans Hypothetical
protein C13E3.1 protein.
Length = 770
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/67 (23%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 50 TGVGSSIATFLKNLKLP--LNKVHIVGFNLGAHVAGVTGRNLEGKVARITGLDPSARDWE 223
T + +++F + +P L VH+ G NL + + + + GL P + W
Sbjct: 553 TNKNNHLSSFWRTECMPIVLGLVHMAGHNLVDQIDSMNQTESSEILHSMPGLSPQTKTWL 612
Query: 224 NNVLRLG 244
V R G
Sbjct: 613 KQVTRYG 619
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 238 TGNKRCQYVEVIHTDGSGVNKNGLGIAIGHIDFFVN 345
T ++CQ + +H + SGVN +A+ H+D N
Sbjct: 551 TLQRQCQELHAVHLEVSGVNGLLTLLALQHVDLVHN 586
>AF099925-10|AAC69504.1| 138|Caenorhabditis elegans Fatty
acid/retinol binding proteinprotein 7, isoform a
protein.
Length = 138
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 167 LEGKVARITGLDPSARDWENNVLRLGTNDVNTLKLFTPTD 286
LEG R+ GL P+A ++ ++ + T + +L + P D
Sbjct: 68 LEGNKKRLDGLSPAAVEYAKKLIHMVTTTLCSLTVGKPID 107
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform b protein.
Length = 1069
Score = 26.6 bits (56), Expect = 10.0
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -2
Query: 354 KTAVDKEVNVSNSNAQAVFVDTRSVGVNNFNVLTSFVPSRSTLFSQSRAEGSRPVILATL 175
K +D+ +NV + QA+ S+ N+FN SF+ + T E S+P+ A L
Sbjct: 229 KNELDRIINVDLDSCQALCTQRLSISSNDFN-CKSFMYNNKTRTCILADERSKPLGRADL 287
>U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform a protein.
Length = 1065
Score = 26.6 bits (56), Expect = 10.0
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -2
Query: 354 KTAVDKEVNVSNSNAQAVFVDTRSVGVNNFNVLTSFVPSRSTLFSQSRAEGSRPVILATL 175
K +D+ +NV + QA+ S+ N+FN SF+ + T E S+P+ A L
Sbjct: 229 KNELDRIINVDLDSCQALCTQRLSISSNDFN-CKSFMYNNKTRTCILADERSKPLGRADL 287
>U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical
protein F26A1.11 protein.
Length = 239
Score = 26.6 bits (56), Expect = 10.0
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 134 GAHVAGVTGRNLEGKVARITGLD--PSARDWENNVLRLGTNDVNTLKLFTPTD 286
GA ++ V + E ++ R G + +W+ LRLG N F PTD
Sbjct: 100 GARLSAVESQR-EREIVRDLGTKYMTTTSNWKQGSLRLGMQRANVQSAFLPTD 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,693,188
Number of Sequences: 27780
Number of extensions: 213733
Number of successful extensions: 530
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 530
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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