Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0424
         (724 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    44   0.005
UniRef50_Q4E2G0 Cluster: Putative uncharacterized protein; n=13;...    33   5.4  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 18/20 (90%), Positives = 19/20 (95%)
 Frame = -1

Query: 433 VLLRWVDELTAHPVLSGYWS 374
           +LLRWVDELTAH VLSGYWS
Sbjct: 155 LLLRWVDELTAHLVLSGYWS 174


>UniRef50_Q4E2G0 Cluster: Putative uncharacterized protein; n=13;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 388

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 20/48 (41%), Positives = 22/48 (45%)
 Frame = -2

Query: 339 GSAPPFKPKRITASR*K*AGWWYLPARSPRGPTTSKGARSGPGPKESS 196
           G APP  P     S    AGW YLP       + S GA SG G +E S
Sbjct: 18  GGAPPAAPAVCGGS----AGWRYLPPEMKTNVSESHGALSGVGQREES 61


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,868,617
Number of Sequences: 1657284
Number of extensions: 13568482
Number of successful extensions: 32989
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 31267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32962
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)