Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0424
         (724 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112187-1|AAI12188.1|  181|Homo sapiens HSD11B1L protein protein.     30   9.6  
BC093950-1|AAH93950.1|  181|Homo sapiens HSD11B1L protein protein.     30   9.6  
AY313896-1|AAP83168.1|  234|Homo sapiens short-chain dehydrogena...    30   9.6  
AY313894-1|AAP83166.1|  315|Homo sapiens short-chain dehydrogena...    30   9.6  
AY268353-1|AAP42287.1|  199|Homo sapiens short-chain dehydrogena...    30   9.6  
AY268352-1|AAP42286.1|  286|Homo sapiens short-chain dehydrogena...    30   9.6  
AY268351-1|AAP42285.1|  205|Homo sapiens short-chain dehydrogena...    30   9.6  

>BC112187-1|AAI12188.1|  181|Homo sapiens HSD11B1L protein protein.
          Length = 181

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 419 GGRAHSPPGVKWLLELIDIYNVNVVTTALPHPSNRNASLL 300
           G RA SP   +WL+++  +  V + + ALP  ++   SL+
Sbjct: 17  GTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLV 56


>BC093950-1|AAH93950.1|  181|Homo sapiens HSD11B1L protein protein.
          Length = 181

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 419 GGRAHSPPGVKWLLELIDIYNVNVVTTALPHPSNRNASLL 300
           G RA SP   +WL+++  +  V + + ALP  ++   SL+
Sbjct: 17  GTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLV 56


>AY313896-1|AAP83168.1|  234|Homo sapiens short-chain
           dehydrogenase/reductase 10g protein.
          Length = 234

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 419 GGRAHSPPGVKWLLELIDIYNVNVVTTALPHPSNRNASLL 300
           G RA SP   +WL+++  +  V + + ALP  ++   SL+
Sbjct: 41  GTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLV 80


>AY313894-1|AAP83166.1|  315|Homo sapiens short-chain
           dehydrogenase/reductase 10e protein.
          Length = 315

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 419 GGRAHSPPGVKWLLELIDIYNVNVVTTALPHPSNRNASLL 300
           G RA SP   +WL+++  +  V + + ALP  ++   SL+
Sbjct: 122 GTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLV 161


>AY268353-1|AAP42287.1|  199|Homo sapiens short-chain
           dehydrogenase/reductase 10c protein.
          Length = 199

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 419 GGRAHSPPGVKWLLELIDIYNVNVVTTALPHPSNRNASLL 300
           G RA SP   +WL+++  +  V + + ALP  ++   SL+
Sbjct: 35  GTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLV 74


>AY268352-1|AAP42286.1|  286|Homo sapiens short-chain
           dehydrogenase/reductase 10b protein.
          Length = 286

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 419 GGRAHSPPGVKWLLELIDIYNVNVVTTALPHPSNRNASLL 300
           G RA SP   +WL+++  +  V + + ALP  ++   SL+
Sbjct: 122 GTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLV 161


>AY268351-1|AAP42285.1|  205|Homo sapiens short-chain
           dehydrogenase/reductase 10a protein.
          Length = 205

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -3

Query: 419 GGRAHSPPGVKWLLELIDIYNVNVVTTALPHPSNRNASLL 300
           G RA SP   +WL+++  +  V + + ALP  ++   SL+
Sbjct: 41  GTRARSPQATRWLMQVNFVSYVQLTSRALPSLTDSKGSLV 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,302,636
Number of Sequences: 237096
Number of extensions: 2105652
Number of successful extensions: 4816
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4808
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)